RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 FRKP42685 505 aaPredicted RBP14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 SSR4P51571 173 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 UFM1P61960 85 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 ZNF169Q14929 603 aaPredicted RBP14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 OR1C1Q15619 314 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 NNATQ16517 81 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 PGS1Q32NB8 556 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 FHL5Q5TD97 284 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 PNPLA2Q96AD5 504 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 COQ8BQ96D53 544 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 ZBED6CLQ96FA7 236 aaPredicted RBP14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 TEX37Q96LM6 180 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 UTP23Q9BRU9 249 aaKnown RBP14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 ITPAQ9BY32 194 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 TCF7L2Q9NQB0 619 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 DCTN4Q9UJW0 460 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 YARS2Q9Y2Z4 477 aaKnown RBP14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 COL6A6A6NMZ7 2263 aa14.36□□□□□ -0.11
LYSMD2-204ENST00000560491 CNTRLQ7Z7A1 2325 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 EXPH5Q8NEV8 1989 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 PLOD3O60568 738 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 OR6B1O95007 311 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 NADKO95544 446 aaPredicted RBP14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 DDX5P17844 614 aaKnown RBP14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 TRHRP34981 398 aaPredicted RBP14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 CASRP41180 1078 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 SOX3P41225 446 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 EMDP50402 254 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 MANFP55145 182 aaKnown RBP14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 TLR1Q15399 786 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 SPINK14Q6IE38 97 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 OR4F3Q6IEY1 312 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 CAMKMTQ7Z624 323 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 ZNF227Q86WZ6 799 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 TMEM156Q8N614 296 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 ZNF441Q8N8Z8 693 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 MDS2Q8NDY4 140 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 ZFP28Q8NHY6 868 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 ASB15Q8WXK1 588 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 ADIPOR1Q96A54 375 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 ELP4Q96EB1 424 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 PRPF18Q99633 342 aaKnown RBP14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 DUSP26Q9BV47 211 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 HES7Q9BYE0 225 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 BHLHE41Q9C0J9 482 aaPredicted RBP14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 CCDC134Q9H6E4 229 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 ACSS1Q9NUB1 689 aaPredicted RBP14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 ATAD3AQ9NVI7 634 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 FGFR1OP2Q9NVK5 253 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 LRFN1Q9P244 771 aa14.35□□□□□ -0.11
LYSMD2-204ENST00000560491 A0A087WV62 115 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 A0A1W2PRB8 838 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 PLOD2O00469 737 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 UBDO15205 165 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 NEURL1O76050 574 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 SORBS2O94875 1100 aaKnown RBP14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 SLITRK5O94991 958 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 C6orf47O95873 294 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 VIMP08670 466 aaKnown RBP14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 IDO1P14902 403 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 IL12AP29459 219 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 CYB561P49447 251 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 HLCSP50747 726 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 NR0B1P51843 470 aaKnown RBP14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 SF3A3Q12874 501 aaKnown RBP eCLIP14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 RPS6KA2Q15349 733 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 PRR30Q53SZ7 412 aaPredicted RBP14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 PIGGQ5H8A4 983 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 SPANXN4Q5MJ08 99 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 HLA-DQA1Q5Y7H0 255 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 CGB2Q6NT52 195 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 IL20RBQ6UXL0 311 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 TMEM64Q6YI46 380 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 CYP4Z2PQ8N1L4 340 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 ERP27Q96DN0 273 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 NXF5Q9H1B4 397 aaKnown RBP14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 CLMPQ9H6B4 373 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 FOLH1BQ9HBA9 442 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 SIRT3Q9NTG7 399 aaPredicted RBP14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 DDX18Q9NVP1 670 aaKnown RBP14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 PRODH2Q9UF12 536 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 ANAPC2Q9UJX6 822 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 MAPRE3Q9UPY8 281 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 PCDHGA10Q9Y5H3 936 aa14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 HEMK1Q9Y5R4 338 aaPredicted RBP14.34□□□□□ -0.11
LYSMD2-204ENST00000560491 EML6Q6ZMW3 1958 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 TRAV17A0A0B4J275 112 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 A0A0G2JND7 137 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 B8ZZF3 427 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 UPK1AO00322 258 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 SUV39H1O43463 412 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 BCAS2O75934 225 aaPredicted RBP14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 ABCB1P08183 1280 aaPredicted RBP14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 KIR3DL1P43629 444 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 CLNS1AP54105 237 aaKnown RBP14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 GYS2P54840 703 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 WNT3P56703 355 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 PHC1P78364 1004 aa14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 ZNF155Q12901 538 aaPredicted RBP14.33□□□□□ -0.12
LYSMD2-204ENST00000560491 MLC1Q15049 377 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms