RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 TMEM81Q6P7N7 255 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 DGAT2L6Q6ZPD8 337 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 NUP54Q7Z3B4 507 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 C1orf52Q8N6N3 182 aaKnown RBP12.94□□□□□ -0.34
TPM1-223ENST00000560445 ZNF615Q8N8J6 731 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 OR5M9Q8NGP3 310 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 NEIL3Q8TAT5 605 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 SPPL2AQ8TCT8 520 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 TMEM41AQ96HV5 264 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 LURAP1Q96LR2 239 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 RILPQ96NA2 401 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 TTYH2Q9BSA4 534 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 ANGPTL4Q9BY76 406 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 STMN4Q9H169 189 aaPredicted RBP12.94□□□□□ -0.34
TPM1-223ENST00000560445 EHD3Q9NZN3 535 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 SENP1Q9P0U3 644 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 KCNN3Q9UGI6 736 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 UTS2RQ9UKP6 389 aa12.94□□□□□ -0.34
TPM1-223ENST00000560445 WBP11Q9Y2W2 641 aaKnown RBP12.94□□□□□ -0.34
TPM1-223ENST00000560445 C15orf38-AP3S2A0A0A6YYH1 394 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 FAM90A27PA6NNH2 459 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 PCDH7O60245 1069 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 ZNF354AO60765 605 aaPredicted RBP12.93□□□□□ -0.34
TPM1-223ENST00000560445 TRIM3O75382 744 aaPredicted RBP12.93□□□□□ -0.34
TPM1-223ENST00000560445 CRCPO75575 148 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 PPM1BO75688 479 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 OR4F21O95013 312 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 MYL2P10916 166 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 GPX3P22352 226 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 ABCD3P28288 659 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 CCT5P48643 541 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 PLCXD2Q0VAA5 305 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 GALNT1Q10472 559 aaPredicted RBP12.93□□□□□ -0.34
TPM1-223ENST00000560445 SLC29A2Q14542 456 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 PRICKLE4Q2TBC4 344 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 CCDC153Q494R4 210 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 EMC4Q5J8M3 183 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 CFAP157Q5JU67 520 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 SLC30A6Q6NXT4 461 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 MARVELD2Q8N4S9 558 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 ACBD4Q8NC06 268 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 RDH11Q8TC12 318 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 ZNF675Q8TD23 568 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 TMCO6Q96DC7 493 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 LCORQ96JN0 433 aaPredicted RBP12.93□□□□□ -0.34
TPM1-223ENST00000560445 TMEM237Q96Q45 408 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 TREX2Q9BQ50 279 aaPredicted RBP12.93□□□□□ -0.34
TPM1-223ENST00000560445 MCCC2Q9HCC0 563 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 TMEM216Q9P0N5 145 aa12.93□□□□□ -0.34
TPM1-223ENST00000560445 LRRC3CA6NJW4 275 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 DVL2O14641 736 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 ZNHIT1O43257 154 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 DLX3O60479 287 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 TRAPPC6AO75865 159 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 CLPSP04118 112 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 GLI4P10075 376 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 DRD5P21918 477 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 MSX1P28360 303 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 MPIP34949 423 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 FEN1P39748 380 aaKnown RBP12.92□□□□□ -0.34
TPM1-223ENST00000560445 PPICP45877 212 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 FBXW4P57775 412 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 TLE4Q04727 773 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 EFR3AQ14156 821 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 TOMM20Q15388 145 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 IMPG1Q17R60 797 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 CES4AQ5XG92 561 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 GALNT18Q6P9A2 607 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 NCCRP1Q6ZVX7 275 aaPredicted RBP12.92□□□□□ -0.34
TPM1-223ENST00000560445 LACC1Q8IV20 430 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 TMEM151AQ8N4L1 468 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 FAM76AQ8TAV0 307 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 ADIPOR1Q96A54 375 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 TM4SF18Q96CE8 201 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 METTL2AQ96IZ6 378 aaKnown RBP12.92□□□□□ -0.34
TPM1-223ENST00000560445 IQCGQ9H095 443 aaKnown RBP12.92□□□□□ -0.34
TPM1-223ENST00000560445 HHATLQ9HCP6 504 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 MIEF1Q9NQG6 463 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 FARSBQ9NSD9 589 aaKnown RBP12.92□□□□□ -0.34
TPM1-223ENST00000560445 ALKBH4Q9NXW9 302 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 MAT2BQ9NZL9 334 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 KLRF1Q9NZS2 232 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 CES1P1Q9UKY3 287 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 GRID1Q9ULK0 1009 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 EDARQ9UNE0 448 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 C15orf41Q9Y2V0 281 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 LIPGQ9Y5X9 500 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 EML6Q6ZMW3 1958 aa12.92□□□□□ -0.34
TPM1-223ENST00000560445 SERTM1A2A2V5 107 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 FRG2CA6NGY1 282 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 C19orf84I3L1E1 186 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 COQ9O75208 318 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 ACTL6AO96019 429 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 HPNP05981 417 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 CELA3AP09093 270 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 PYGBP11216 843 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 DDX5P17844 614 aaKnown RBP12.91□□□□□ -0.34
TPM1-223ENST00000560445 TSPAN8P19075 237 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 TIA1P31483 386 aaKnown RBP eCLIP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms