RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	VPS33A	Q96AX1	596 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	ZNF354B	Q96LW1	612 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	AGAP4	Q96P64	663 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	LRRC37B	Q96QE4	947 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	PANX1	Q96RD7	426 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	SLC25A23	Q9BV35	468 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	MYLK2	Q9H1R3	596 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	SLC52A3	Q9NQ40	469 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	NDUFAF1	Q9Y375	327 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	SNX8	Q9Y5X2	465 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	CAPN7	Q9Y6W3	813 aa		11.4	□□□□□ -0.58
USP8-209	ENST00000560297	SCN2A	Q99250	2005 aa		11.4	□□□□□ -0.59
USP8-209	ENST00000560297	C2orf92	A0A1B0GVN3	265 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297		A6NL46	340 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297		A8MUI8	341 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	MASP2	O00187	686 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	NR5A2	O00482	541 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	RFXANK	O14593	260 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	SOX30	O94993	753 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	CPSF4	O95639	269 aa	Known RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	ALPP	P05187	535 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	ABCB1	P08183	1280 aa	Predicted RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	ZCCHC18	P0CG32	403 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	UQCRC2	P22695	453 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	PTGER1	P34995	402 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	CDK9	P50750	372 aa	Known RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	DCAF7	P61962	342 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	RHD	Q02161	417 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	STX5	Q13190	355 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	CYLC2	Q14093	348 aa	Predicted RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	EXOSC7	Q15024	291 aa	Known RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	TLR1	Q15399	786 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	SPDYE7P	Q495Y7	208 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	TIGD2	Q4W5G0	525 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	CRB2	Q5IJ48	1285 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	HLA-DQA1	Q5Y7H0	255 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	ZCCHC12	Q6PEW1	402 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	ZNF621	Q6ZSS3	439 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	RPS19BP1	Q86WX3	136 aa	Known RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	CLECL1	Q8IZS7	167 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	LGI4	Q8N135	537 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	KIF2B	Q8N4N8	673 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	ZNF321P	Q8N8H1	164 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	C17orf47	Q8NEP4	570 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	NUP43	Q8NFH3	380 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	OR56A1	Q8NGH5	318 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	C16orf52	Q8NHV5	167 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	RP9	Q8TA86	221 aa	Known RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	SFXN5	Q8TD22	340 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	BRIX1	Q8TDN6	353 aa	Known RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	PSMF1	Q92530	271 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	GTF2H4	Q92759	462 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	TP53INP1	Q96A56	240 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	MAGED4	Q96JG8	741 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	LMF1	Q96S06	567 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	CCDC106	Q9BWC9	280 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	GPR83	Q9NYM4	423 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	LEF1	Q9UJU2	399 aa	Predicted RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	ZNF223	Q9UK11	482 aa	Predicted RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	VPS4A	Q9UN37	437 aa		11.39	□□□□□ -0.59
USP8-209	ENST00000560297	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.39	□□□□□ -0.59
USP8-209	ENST00000560297	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.38	□□□□□ -0.59
USP8-209	ENST00000560297	BBIP1	A8MTZ0	92 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	MKRN2OS	H3BPM6	223 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ANGPT2	O15123	496 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ERN1	O75460	977 aa	Known RBP	11.38	□□□□□ -0.59
USP8-209	ENST00000560297	DNAJB5	O75953	348 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	PSMG1	O95456	288 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ANP32D	O95626	131 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	CLPS	P04118	112 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	CELA2A	P08217	269 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	CAPN3	P20807	821 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	DRD5	P21918	477 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	PPIC	P45877	212 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	EMD	P50402	254 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	PRKAG1	P54619	331 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	PSPH	P78330	225 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	MEP1A	Q16819	746 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	C6orf10	Q5SRN2	563 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ABHD17B	Q5VST6	288 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	C19orf48	Q6RUI8	117 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ISLR2	Q6UXK2	745 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	GK5	Q6ZS86	529 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	C9orf40	Q8IXQ3	194 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	SLC15A4	Q8N697	577 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	EXTL1	Q92935	676 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	CMTM5	Q96DZ9	223 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	FAM120B	Q96EK7	910 aa	Known RBP	11.38	□□□□□ -0.59
USP8-209	ENST00000560297	WWTR1	Q9GZV5	400 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	CDCP1	Q9H5V8	836 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ZNF552	Q9H707	407 aa	Predicted RBP	11.38	□□□□□ -0.59
USP8-209	ENST00000560297	CXorf36	Q9H7Y0	433 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	SERHL	Q9NQF3	203 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.38	□□□□□ -0.59
USP8-209	ENST00000560297	STMN3	Q9NZ72	180 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ARMCX1	Q9P291	453 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ABI3	Q9P2A4	366 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	MYOT	Q9UBF9	498 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	ERVK-11	Q9UQG0	969 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms