RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CCT3P49368 545 aaKnown RBP8.73□□□□□ -1.01
HERC1-206ENST00000559996 SLC37A1P57057 533 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 OR4D2P58180 307 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 NFYCQ13952 458 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 EXOSC7Q15024 291 aaKnown RBP8.73□□□□□ -1.01
HERC1-206ENST00000559996 ELAVL1Q15717 326 aaKnown RBP8.73□□□□□ -1.01
HERC1-206ENST00000559996 MAPK11Q15759 364 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 TRMT5Q32P41 509 aaKnown RBP8.73□□□□□ -1.01
HERC1-206ENST00000559996 RABL3Q5HYI8 236 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 COX20Q5RI15 118 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 MFSD4BQ5TF39 518 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 PGM2L1Q6PCE3 622 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 TMEM64Q6YI46 380 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 ZNF621Q6ZSS3 439 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 C6orf120Q7Z4R8 191 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 YTHDF3Q7Z739 585 aaKnown RBP8.73□□□□□ -1.01
HERC1-206ENST00000559996 DHDDSQ86SQ9 333 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 CALHM3Q86XJ0 350 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 OR11G2Q8NGC1 345 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 OR5AK3PQ8NH89 298 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 DNAJB8Q8NHS0 232 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 RIT1Q92963 219 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 NXPE2Q96DL1 559 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 NEURL3Q96EH8 262 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 C16orf58Q96GQ5 468 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 ZNF583Q96ND8 569 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 DGAT2Q96PD7 388 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 CPPED1Q9BRF8 314 aaPredicted RBP8.73□□□□□ -1.01
HERC1-206ENST00000559996 NUDT9Q9BW91 350 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 ZNF700Q9H0M5 742 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 TPT1P8Q9HAU6 139 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 ADAP2Q9NPF8 381 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 TMEM181Q9P2C4 612 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 ABCD2Q9UBJ2 740 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 CD300AQ9UGN4 299 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 KCNE3Q9Y6H6 103 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 CELSR3Q9NYQ7 3312 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 FREM2Q5SZK8 3169 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 SAGE2PA6NJ88 616 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 TAF4O00268 1085 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 CLIC1O00299 241 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 GSC2O15499 205 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 SORBS2O94875 1100 aaKnown RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 SLITRK5O94991 958 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 IFNA16P05015 189 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 KRT16P08779 473 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 DDX5P17844 614 aaKnown RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 FOLR3P41439 243 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 NUDT2P50583 147 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 CASP9P55211 416 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 PSME3P61289 254 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 RPS15P62841 145 aaKnown RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 Q0VFX4 171 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 ZNF267Q14586 743 aaPredicted RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 RGNQ15493 299 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 ADRM1Q16186 407 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 ZSCAN26Q16670 478 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 MMEL1Q495T6 779 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 AP1ARQ63HQ0 302 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 DNAJC14Q6Y2X3 702 aaPredicted RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 VASH2Q86V25 355 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 GALNT12Q8IXK2 581 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 PGAM4Q8N0Y7 254 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 PCYOX1LQ8NBM8 494 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 MORN4Q8NDC4 146 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 C7orf57Q8NEG2 295 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 NUP43Q8NFH3 380 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 OR52R1Q8NGF1 315 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 ZFP28Q8NHY6 868 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 MIPOL1Q8TD10 442 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 SLC2A12Q8TD20 617 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 SFXN5Q8TD22 340 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 FGF11Q92914 225 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 UTP4Q969X6 686 aaKnown RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 ADIPOR1Q96A54 375 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 NACC2Q96BF6 587 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 HOPXQ9BPY8 73 aaPredicted RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 PELOQ9BRX2 385 aaKnown RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 SLC35A5Q9BS91 424 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 BTBD10Q9BSF8 475 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 RSPO3Q9BXY4 272 aaPredicted RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 CADM1Q9BY67 442 aaKnown RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 OR10A5Q9H207 317 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 KAT8Q9H7Z6 458 aaKnown RBP8.72□□□□□ -1.01
HERC1-206ENST00000559996 NEUROD4Q9HD90 331 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 GIMAP4Q9NUV9 329 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 PTGFRNQ9P2B2 879 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 PACSIN3Q9UKS6 424 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 USP22Q9UPT9 525 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 ERVK-19Q9WJR5 959 aa8.72□□□□□ -1.01
HERC1-206ENST00000559996 MED19A0JLT2 244 aaPredicted RBP8.71□□□□□ -1.02
HERC1-206ENST00000559996 NME4O00746 187 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 PCDH17O14917 1159 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 OR10H2O60403 315 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 TNFRSF21O75509 655 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 ATP5HO75947 161 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 SEC24DO94855 1032 aaPredicted RBP8.71□□□□□ -1.02
HERC1-206ENST00000559996 IGHEP01854 428 aa8.71□□□□□ -1.02
HERC1-206ENST00000559996 HMGN2P05204 90 aaKnown RBP8.71□□□□□ -1.02
HERC1-206ENST00000559996 CELA2AP08217 269 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms