RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 SSR4P51571 173 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 GUCY1A3Q02108 690 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 OC90Q02509 493 aaPredicted RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 C19orf57Q0VDD7 668 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 ZNF169Q14929 603 aaPredicted RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 OR1C1Q15619 314 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 LSM12Q3MHD2 195 aaKnown RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 TMEM198Q66K66 360 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 TMEM156Q8N614 296 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 MDS2Q8NDY4 140 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 ERP27Q96DN0 273 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 ELP4Q96EB1 424 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 ZBED6CLQ96FA7 236 aaPredicted RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 PRPF18Q99633 342 aaKnown RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 DPY30Q9C005 99 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 ACSS1Q9NUB1 689 aaPredicted RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 LRFN1Q9P244 771 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 HEMK1Q9Y5R4 338 aaPredicted RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 GPR45Q9Y5Y3 372 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 A0A087WV62 115 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 TRAV17A0A0B4J275 112 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 NME6O75414 186 aaPredicted RBP18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 NEURL1O76050 574 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 OR6B1O95007 311 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 GPX3P22352 226 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 CASRP41180 1078 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 MC3RP41968 323 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 CYB561P49447 251 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 AQP5P55064 265 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 MANFP55145 182 aaKnown RBP18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 TMEM107Q6UX40 140 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 TP53INP1Q96A56 240 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 TEX37Q96LM6 180 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 EBF4Q9BQW3 602 aa18.76■□□□□ 0.59
TSPAN3-207ENST00000559494 UPK1AO00322 258 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 PRAMEF2O60811 474 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 BCAS2O75934 225 aaPredicted RBP18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 DDX5P17844 614 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 SOX3P41225 446 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 NR0B1P51843 470 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 NME5P56597 212 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 UFM1P61960 85 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 HSPB3Q12988 150 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 PGS1Q32NB8 556 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 LYPD8Q6UX82 237 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 IL20RBQ6UXL0 311 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 CAMKMTQ7Z624 323 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 ASB15Q8WXK1 588 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 THOC1Q96FV9 657 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 DUSP26Q9BV47 211 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 HES7Q9BYE0 225 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 ATAD3AQ9NVI7 634 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 C19orf53Q9UNZ5 99 aaPredicted RBP18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 MAPRE3Q9UPY8 281 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 CFL2Q9Y281 166 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 PCDHGA10Q9Y5H3 936 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 EML6Q6ZMW3 1958 aa18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 RP1L1Q8IWN7 2480 aaPredicted RBP18.75■□□□□ 0.59
TSPAN3-207ENST00000559494 A0A1W2PRB8 838 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 SLITRK5O94991 958 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 IL12AP29459 219 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 MDH1P40925 334 aaKnown RBP18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 CDK9P50750 372 aaKnown RBP18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 WNT3P56703 355 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 PHC1P78364 1004 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 MLC1Q15049 377 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 ZNF766Q5HY98 468 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 HLA-DQA1Q5Y7H0 255 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 OR2L13Q8N349 312 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 SLC15A4Q8N697 577 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 NATD1Q8N6N6 113 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 ZFP28Q8NHY6 868 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 MAGED4Q96JG8 741 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 MARK4Q96L34 752 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 CCDC28BQ9BUN5 200 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 ITPAQ9BY32 194 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 BHLHE41Q9C0J9 482 aaPredicted RBP18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 NXF5Q9H1B4 397 aaKnown RBP18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 EPN3Q9H201 632 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 TCF7L2Q9NQB0 619 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 PRODH2Q9UF12 536 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 TTLL8A6PVC2 850 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 A8MVJ9 347 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 UBDO15205 165 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 SP1P08047 785 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 IFI6P09912 130 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 GPC1P35052 558 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 MLLT10P55197 1068 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 OR4F3Q6IEY1 312 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 SLC25A25Q6KCM7 469 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 RPUSD3Q6P087 351 aaKnown RBP18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 OPN5Q6U736 354 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 TMEM64Q6YI46 380 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 ACAD11Q709F0 780 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 MDGA2Q7Z553 956 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 CYP4Z2PQ8N1L4 340 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 CISD2Q8N5K1 135 aaKnown RBP18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 HORMAD2Q8N7B1 307 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 C17orf47Q8NEP4 570 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 RFWD2Q8NHY2 731 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms