RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 EFCAB11Q9BUY7 163 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 NPLQ9BXD5 320 aaPredicted RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 CD244Q9BZW8 370 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 RAB17Q9H0T7 212 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 EXO5Q9H790 373 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 ACTR8Q9H981 624 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 NMRAL1Q9HBL8 299 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 NUDT4Q9NZJ9 180 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 CPSF2Q9P2I0 782 aaKnown RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 RNF14Q9UBS8 474 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 PTBP2Q9UKA9 531 aaKnown RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 DAPP1Q9UN19 280 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 MEMO1Q9Y316 297 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 PCDHGB6Q9Y5F9 930 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 KLF2Q9Y5W3 355 aaPredicted RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.79□□□□□ -1.32
SPG11-213ENST00000558988 SPACA6W5XKT8 324 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 UNC79Q9P2D8 2635 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 PRRC2CQ9Y520 2896 aaKnown RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 PKDREJQ9NTG1 2253 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 PINLYPA6NC86 204 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 GLOD5A6NK44 160 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 NPIPA2E9PIF3 369 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 NPIPA3F8WFD2 350 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ACOT7O00154 380 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 FGF17O60258 216 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 LRATO95237 230 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 WISP3O95389 354 aaPredicted RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 CLDN14O95500 239 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 THBDP07204 575 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 LTA4HP09960 611 aaKnown RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 COX7A2P14406 83 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 EPORP19235 508 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ATP5A1P25705 553 aaKnown RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 GSTM2P28161 218 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 PTGS2P35354 604 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 DNASE1L1P49184 302 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 GPR143P51810 404 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ASPHQ12797 758 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 SLAMF1Q13291 335 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ELAVL1Q15717 326 aaKnown RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 ZKSCAN8Q15776 578 aaPredicted RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 PFKFB4Q16877 469 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ZNF630Q2M218 657 aaPredicted RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 GRTP1Q5TC63 336 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 C8orf74Q6P047 294 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ZDHHC24Q6UX98 284 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 HSDL2Q6YN16 418 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 GDF7Q7Z4P5 450 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 FGD2Q7Z6J4 655 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 DOLPP1Q86YN1 238 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 TICAM1Q8IUC6 712 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 TMEM132CQ8N3T6 1108 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 FAM169BQ8N8A8 192 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ACOT4Q8N9L9 421 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 PSD4Q8NDX1 1056 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 OR52N2Q8NGI0 321 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 OR5M9Q8NGP3 310 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 OR5M3Q8NGP4 307 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ADAMTS18Q8TE60 1221 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ZNF473Q8WTR7 871 aaKnown RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 CA5BP1Q8WTZ4 195 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 PPWD1Q96BP3 646 aaKnown RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 MTFMTQ96DP5 389 aaKnown RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 SCYL1Q96KG9 808 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 JSRP1Q96MG2 331 aaPredicted RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 DGAT2Q96PD7 388 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 GAL3ST4Q96RP7 486 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 CNPPD1Q9BV87 410 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 MS4A8Q9BY19 250 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 EHD1Q9H4M9 534 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 NT5DC2Q9H857 520 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 CLK4Q9HAZ1 481 aaKnown RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 CHST11Q9NPF2 352 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 DEPPQ9NTK1 212 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 COPS7AQ9UBW8 275 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ZNF835Q9Y2P0 537 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 YARS2Q9Y2Z4 477 aaKnown RBP6.78□□□□□ -1.32
SPG11-213ENST00000558988 ACOT9Q9Y305 439 aa6.78□□□□□ -1.32
SPG11-213ENST00000558988 ATP6AP2A0A1C7CYW4 349 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 NKX2-6A6NCS4 301 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 WASHC1A8K0Z3 465 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 K7EPI3 171 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 OR10H2O60403 315 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 CTNSO60931 367 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 KERAO60938 352 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 ATP6AP2O75787 350 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 URI1O94763 535 aaPredicted RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 ETHE1O95571 254 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 TBX6O95947 436 aaPredicted RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 GBAP04062 536 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 GSTA2P09210 222 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 HIST1H1TP22492 207 aaPredicted RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 CRABP2P29373 138 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 GGT5P36269 586 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 PPIAP62937 165 aaKnown RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 GUCY2DQ02846 1103 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 CAV1Q03135 178 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 SERTAD2Q14140 314 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 ZNF267Q14586 743 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms