RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 CNPPD1Q9BV87 410 aa10.38□□□□□ -0.75
BMP4-204ENST00000558961 MYLK2Q9H1R3 596 aa10.38□□□□□ -0.75
BMP4-204ENST00000558961 TSPAN10Q9H1Z9 355 aaPredicted RBP10.38□□□□□ -0.75
BMP4-204ENST00000558961 ZDHHC11Q9H8X9 412 aa10.38□□□□□ -0.75
BMP4-204ENST00000558961 TNFRSF12AQ9NP84 129 aa10.38□□□□□ -0.75
BMP4-204ENST00000558961 ZDHHC2Q9UIJ5 367 aa10.38□□□□□ -0.75
BMP4-204ENST00000558961 MCM8Q9UJA3 840 aa10.38□□□□□ -0.75
BMP4-204ENST00000558961 NPIPA1Q9UND3 350 aa10.38□□□□□ -0.75
BMP4-204ENST00000558961 ERVK-11Q9UQG0 969 aa10.38□□□□□ -0.75
BMP4-204ENST00000558961 USH1CQ9Y6N9 552 aa10.38□□□□□ -0.75
BMP4-204ENST00000558961 A1L4Q6 167 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 CCT8L1PA6NM43 557 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 SLCO1B7G3V0H7 640 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 TFECO14948 347 aaPredicted RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 GLSO94925 669 aaPredicted RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 HSPA4LO95757 839 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 FBXO45P0C2W1 286 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 CT62P0C5K7 136 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 PORP16435 677 aaPredicted RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 S1PR1P21453 382 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 SOX18P35713 384 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 IDH3AP50213 366 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 RPL14P50914 215 aaKnown RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 FOXA1P55317 472 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 GPR85P60893 370 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 RAE1P78406 368 aaKnown RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 FOXO1Q12778 655 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 ZNF267Q14586 743 aaPredicted RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 HYAL4Q2M3T9 481 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 PRICKLE4Q2TBC4 344 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 GALNTL6Q49A17 601 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 GK5Q6ZS86 529 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 RNF165Q6ZSG1 346 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 SLC29A4Q7RTT9 530 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 WDR75Q8IWA0 830 aaKnown RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 KIRREL3Q8IZU9 778 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 MMP21Q8N119 569 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 CCNYL1Q8N7R7 359 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 C17orf47Q8NEP4 570 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 PAQR8Q8TEZ7 354 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 TP53INP1Q96A56 240 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 CTHRC1Q96CG8 243 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 SPACA9Q96E40 222 aaPredicted RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 CCDC120Q96HB5 630 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 MAELQ96JY0 434 aaKnown RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 ZNF681Q96N22 645 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 KCNA7Q96RP8 456 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 FAM173AQ9BQD7 235 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 TMEM120AQ9BXJ8 343 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 SHCBP1LQ9BZQ2 653 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 EML4Q9HC35 981 aaKnown RBP10.37□□□□□ -0.75
BMP4-204ENST00000558961 MID1IP1Q9NPA3 183 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 SACM1LQ9NTJ5 587 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 ZNF639Q9UID6 485 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 NCKAP5O14513 1909 aa10.37□□□□□ -0.75
BMP4-204ENST00000558961 MYO7BQ6PIF6 2116 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 TRGV8A0A0C4DH27 118 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 A0A0G2JMM0 328 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 A0A1W2PPB8 328 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 A0A1W2PRS3 328 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 PINLYPA6NC86 204 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 KIR3DP1A8MWS1 328 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 NPIPB8E9PQR5 432 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 EBAG9O00559 213 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 CCL21O00585 134 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 HDAC3O15379 428 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 HS6ST1O60243 411 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 PCDH7O60245 1069 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 CCL3P10147 92 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 CNR1P21554 472 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 SSTR4P31391 388 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 TIA1P31483 386 aaKnown RBP eCLIP10.36□□□□□ -0.75
BMP4-204ENST00000558961 PTGER1P34995 402 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 XKP51811 444 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 ARFIP2P53365 341 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 AQP5P55064 265 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 MGAT2Q10469 447 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 MAP4K2Q12851 820 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 CEBPEQ15744 281 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 C3AR1Q16581 482 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 NTRK2Q16620 822 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 ZNF750Q32MQ0 723 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 CFAP157Q5JU67 520 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 RPTNQ6XPR3 784 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 TRIM46Q7Z4K8 759 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 VWA5B2Q8N398 1253 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 FITM2Q8N6M3 262 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 OR7G1Q8NGA0 311 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 PHF10Q8WUB8 498 aaKnown RBP10.36□□□□□ -0.75
BMP4-204ENST00000558961 ITLN2Q8WWU7 325 aaPredicted RBP10.36□□□□□ -0.75
BMP4-204ENST00000558961 ADIPOR1Q96A54 375 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 CNRIP1Q96F85 164 aaPredicted RBP10.36□□□□□ -0.75
BMP4-204ENST00000558961 FAIM2Q9BWQ8 316 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 TTTY12Q9BZ98 90 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 MAT2BQ9NZL9 334 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 EHD3Q9NZN3 535 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 SUCOQ9UBS9 1254 aaKnown RBP10.36□□□□□ -0.75
BMP4-204ENST00000558961 TINAGQ9UJW2 476 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 TIMM22Q9Y584 194 aa10.36□□□□□ -0.75
BMP4-204ENST00000558961 CHCHD2Q9Y6H1 151 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms