RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ZNF180Q9UJW8 692 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 GNB5O14775 395 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 DYRK3O43781 588 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 DLX3O60479 287 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 SMIM24O75264 130 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 ERAL1O75616 437 aaKnown RBP12.39□□□□□ -0.43
VPS18-203ENST00000558855 ABCB1P08183 1280 aaPredicted RBP12.39□□□□□ -0.43
VPS18-203ENST00000558855 FAM153BP0C7A2 387 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 PORP16435 677 aaPredicted RBP12.39□□□□□ -0.43
VPS18-203ENST00000558855 PCSK2P16519 638 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 ABCD3P28288 659 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 HSD17B3P37058 310 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 SERPINB9P50453 376 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 MAPK12P53778 367 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 MRPS35P82673 323 aaKnown RBP12.39□□□□□ -0.43
VPS18-203ENST00000558855 IFT88Q13099 833 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 BIKQ13323 160 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 TSNAXIP1Q2TAA8 658 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 FAM153CQ494X1 144 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 ACSF3Q4G176 576 aaPredicted RBP12.39□□□□□ -0.43
VPS18-203ENST00000558855 WIPI1Q5MNZ9 446 aaPredicted RBP12.39□□□□□ -0.43
VPS18-203ENST00000558855 WDR53Q7Z5U6 358 aaPredicted RBP12.39□□□□□ -0.43
VPS18-203ENST00000558855 VWA5B2Q8N398 1253 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 CDYL2Q8N8U2 506 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 SELENOMQ8WWX9 145 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 TP53INP1Q96A56 240 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 CTHRC1Q96CG8 243 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 KCNA7Q96RP8 456 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 TIMP4Q99727 224 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 MRPL57Q9BQC6 102 aaKnown RBP12.39□□□□□ -0.43
VPS18-203ENST00000558855 GALNT9Q9HCQ5 603 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 MTRF1LQ9UGC7 380 aaKnown RBP12.39□□□□□ -0.43
VPS18-203ENST00000558855 ADAM29Q9UKF5 820 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 C15orf41Q9Y2V0 281 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 PLLPQ9Y342 182 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 SPG11Q96JI7 2443 aa12.39□□□□□ -0.43
VPS18-203ENST00000558855 C15orf38-AP3S2A0A0A6YYH1 394 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 ANKRD33BA6NCL7 494 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 MANBAO00462 879 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 COL6A2P12110 1019 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 CNTFP26441 200 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 PTPN6P29350 595 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 EMDP50402 254 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 CDK9P50750 372 aaKnown RBP12.38□□□□□ -0.43
VPS18-203ENST00000558855 CLCQ05315 142 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 ZNF678Q5SXM1 525 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 RIPPLY2Q5TAB7 128 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 SCIMPQ6UWF3 145 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 GSPT2Q8IYD1 628 aaKnown RBP12.38□□□□□ -0.43
VPS18-203ENST00000558855 MZB1Q8WU39 189 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 SH3GL2Q99962 352 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 UGT2B28Q9BY64 529 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 ACPTQ9BZG2 426 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 BRINP2Q9C0B6 783 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 ELOVL6Q9H5J4 265 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 QPCTLQ9NXS2 382 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 TRPS1Q9UHF7 1281 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 EMCNQ9ULC0 261 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 NFU1Q9UMS0 254 aa12.38□□□□□ -0.43
VPS18-203ENST00000558855 AKAP6Q13023 2319 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 GOLGA8RI6L899 631 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 UGT2B11O75310 529 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 KRT38O76015 456 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 ATP1B1P05026 303 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 HPNP05981 417 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 IL3P08700 152 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 BMP7P18075 431 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 CEACAM8P31997 349 aaPredicted RBP12.37□□□□□ -0.43
VPS18-203ENST00000558855 SLCO1A2P46721 670 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 ALDH9A1P49189 494 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 AGFG1P52594 562 aaKnown RBP12.37□□□□□ -0.43
VPS18-203ENST00000558855 ZNF136P52737 540 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 NAGLUP54802 743 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 HMGCS1Q01581 520 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 MAP4K2Q12851 820 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 TEX35Q5T0J7 233 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 NPSR1Q6W5P4 371 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 YRDCQ86U90 279 aaKnown RBP12.37□□□□□ -0.43
VPS18-203ENST00000558855 ZZZ3Q8IYH5 903 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 DND1Q8IYX4 353 aaKnown RBP12.37□□□□□ -0.43
VPS18-203ENST00000558855 TAGAPQ8N103 731 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 FAM83FQ8NEG4 500 aaPredicted RBP12.37□□□□□ -0.43
VPS18-203ENST00000558855 OR52R1Q8NGF1 315 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 KLHL29Q96CT2 875 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 OMA1Q96E52 524 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 APIPQ96GX9 242 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 WDYHV1Q96HA8 205 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 ZNF559Q9BR84 538 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 TXLNGYQ9BZA5 131 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 PRDM14Q9GZV8 571 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 TNFRSF12AQ9NP84 129 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 BCAP29Q9UHQ4 241 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 TMCO1Q9UM00 188 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 MPDZO75970 2070 aa12.37□□□□□ -0.43
VPS18-203ENST00000558855 PRRC2AP48634 2157 aaKnown RBP12.37□□□□□ -0.43
VPS18-203ENST00000558855 NF1P21359 2839 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 A0A087WUV0 522 aaPredicted RBP12.36□□□□□ -0.43
VPS18-203ENST00000558855 EXOC1LA0A1B0GW35 172 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 C1orf226A1L170 272 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 UBFD1O14562 309 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms