RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 LYVE1Q9Y5Y7 322 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 KCNE3Q9Y6H6 103 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 UNC13CQ8NB66 2214 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 RIF1Q5UIP0 2472 aaKnown RBP12.15□□□□□ -0.47
SMAD3-207ENST00000558763 PROB1E7EW31 1015 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 E9PQ18 207 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 EMC8O43402 210 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 FGF17O60258 216 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 MITFO75030 526 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 NME6O75414 186 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 ALBP02768 609 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 CHRM4P08173 479 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF10P21506 573 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 XCR1P46094 333 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 KHKP50053 298 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 KCNAB2Q13303 367 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 KRT80Q6KB66 452 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 FAHD1Q6P587 224 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 KLHL35Q6PF15 583 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 DBX2Q6ZNG2 339 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 FAM92BQ6ZTR7 304 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 SZRD1Q7Z422 152 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 MCATQ8IVS2 390 aaKnown RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 LGI4Q8N135 537 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 LRRC25Q8N386 305 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 SPPL2AQ8TCT8 520 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 GEMIN6Q8WXD5 167 aaKnown RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 KAT2AQ92830 837 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 MAGED4Q96JG8 741 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 CNDP2Q96KP4 475 aaKnown RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 CCDC3Q9BQI4 270 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 WFDC6Q9BQY6 131 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 RAB33BQ9H082 229 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 SYNDIG1Q9H7V2 258 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 GIMAP4Q9NUV9 329 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 FAM118AQ9NWS6 357 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 P2RX2Q9UBL9 471 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 FTSJ1Q9UET6 329 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF451Q9Y4E5 1061 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 GPC6Q9Y625 555 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF780BQ9Y6R6 833 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 IGHV1OR21-1A0A087WYE8 117 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 IGHV5-51A0A0C4DH38 117 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 SGK494L7N484 410 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 B4GAT1O43505 415 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 HS6ST1O60243 411 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 LDOC1O95751 146 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 EPPINO95925 133 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 CKMT1AP12532 417 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 CPMP14384 443 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 RRM2P31350 389 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 POLR2IP36954 125 aaKnown RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 LIMS1P48059 325 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 XKP51811 444 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 EPHA4P54764 986 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 SHC2P98077 582 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 ZC3H12BQ5HYM0 836 aaKnown RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 EXOSC6Q5RKV6 272 aaKnown RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 FHL5Q5TD97 284 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 RNF220Q5VTB9 566 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 SLC44A2Q8IWA5 706 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-207ENST00000558763 OR2L13Q8N349 312 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 METTL25Q8N6Q8 603 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 OR4K14Q8NGD5 310 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 OR6C4Q8NGE1 309 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 IFI44Q8TCB0 444 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 NCSTNQ92542 709 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 MUS81Q96NY9 551 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 YIPF4Q9BSR8 244 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 REEP1Q9H902 201 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 BCL2L10Q9HD36 194 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 EPHA6Q9UF33 1036 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 PSME2Q9UL46 239 aa12.14□□□□□ -0.47
SMAD3-207ENST00000558763 TLCD2A6NGC4 264 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 TRIM64CA6NLI5 447 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 FAM227AF5H4B4 570 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 J3KTA2 159 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 FOXS1O43638 330 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 DUX1O43812 170 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 RDH16O75452 317 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 DNAJB5O75953 348 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 ZIC2O95409 532 aaPredicted RBP12.13□□□□□ -0.47
SMAD3-207ENST00000558763 IFNA14P01570 189 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 GPR3P46089 330 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 KCNJ5P48544 419 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 PRKAG1P54619 331 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 PRR5P85299 388 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 ID2Q02363 134 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 CFHR1Q03591 330 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 NR1D2Q14995 579 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF628Q5EBL2 1059 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 NUP43Q8NFH3 380 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 OR4D11Q8NGI4 311 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 OR9A4Q8NGU2 314 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 XAGE5Q8WWM1 108 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 LZICQ8WZA0 190 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 NAT6Q93015 286 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 RMND5BQ96G75 393 aaPredicted RBP12.13□□□□□ -0.47
SMAD3-207ENST00000558763 TCTN2Q96GX1 697 aa12.13□□□□□ -0.47
SMAD3-207ENST00000558763 NPLQ9BXD5 320 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms