RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PNPLA2Q96AD5 504 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF764Q96H86 408 aaPredicted RBP14.39□□□□□ -0.11
LINC01220-201ENST00000558575 FBXL20Q96IG2 436 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 PELOQ9BRX2 385 aaKnown RBP14.39□□□□□ -0.11
LINC01220-201ENST00000558575 CDCP1Q9H5V8 836 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 LIN28AQ9H9Z2 209 aaKnown RBP14.39□□□□□ -0.11
LINC01220-201ENST00000558575 PLA2G3Q9NZ20 509 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 MAT2BQ9NZL9 334 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 ITGB1BP2Q9UKP3 347 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 ERVK-19Q9WJR5 959 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF451Q9Y4E5 1061 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 PCDHGB7Q9Y5F8 929 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 CSAG2Q9Y5P2 127 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF780BQ9Y6R6 833 aa14.39□□□□□ -0.11
LINC01220-201ENST00000558575 DPM1O60762 260 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 DIAPH2O60879 1101 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 LAMP1P11279 417 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 COX7A2P14406 83 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 MDH1P40925 334 aaKnown RBP14.38□□□□□ -0.11
LINC01220-201ENST00000558575 MLF1P58340 268 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 MAD2L1Q13257 205 aaPredicted RBP14.38□□□□□ -0.11
LINC01220-201ENST00000558575 MFAP5Q13361 173 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 LSM12Q3MHD2 195 aaKnown RBP14.38□□□□□ -0.11
LINC01220-201ENST00000558575 TRMT12Q53H54 448 aaKnown RBP14.38□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF628Q5EBL2 1059 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 ACER2Q5QJU3 275 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 TMEM198Q66K66 360 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 RPS19BP1Q86WX3 136 aaKnown RBP14.38□□□□□ -0.11
LINC01220-201ENST00000558575 GALNT12Q8IXK2 581 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 LRRC25Q8N386 305 aaPredicted RBP14.38□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF615Q8N8J6 731 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 OR7A2PQ8NGA2 310 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 OR9A2Q8NGT5 310 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 THAP3Q8WTV1 239 aaPredicted RBP14.38□□□□□ -0.11
LINC01220-201ENST00000558575 CIDECQ96AQ7 238 aaPredicted RBP14.38□□□□□ -0.11
LINC01220-201ENST00000558575 COQ8BQ96D53 544 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 LURAP1Q96LR2 239 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 AMDHD1Q96NU7 426 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 EBF4Q9BQW3 602 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 CNPPD1Q9BV87 410 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 DEFB126Q9BYW3 111 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 GLIPR2Q9H4G4 154 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 ANKRA2Q9H9E1 313 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 MIEF1Q9NQG6 463 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 STMN3Q9NZ72 180 aa14.38□□□□□ -0.11
LINC01220-201ENST00000558575 NOP53Q9NZM5 478 aaKnown RBP14.38□□□□□ -0.11
LINC01220-201ENST00000558575 DNHD1Q96M86 4753 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 SCAMP2O15127 329 aaKnown RBP14.37□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF354AO60765 605 aaPredicted RBP14.37□□□□□ -0.11
LINC01220-201ENST00000558575 ZFAND5O76080 213 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 TGDSO95455 350 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 WDPCPO95876 746 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 CBX7O95931 251 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 PCSK2P16519 638 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 FRKP42685 505 aaPredicted RBP14.37□□□□□ -0.11
LINC01220-201ENST00000558575 AQP5P55064 265 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 SLC37A1P57057 533 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 C21orf58P58505 322 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 AP2B1P63010 937 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 RNF4P78317 190 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 MRPS35P82673 323 aaKnown RBP14.37□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF468Q5VIY5 522 aaPredicted RBP14.37□□□□□ -0.11
LINC01220-201ENST00000558575 IRAK1BP1Q5VVH5 260 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 SPATA19Q7Z5L4 167 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 C9orf40Q8IXQ3 194 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 CISD2Q8N5K1 135 aaKnown RBP14.37□□□□□ -0.11
LINC01220-201ENST00000558575 CATSPER1Q8NEC5 780 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF675Q8TD23 568 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 KAT2AQ92830 837 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 PPCDCQ96CD2 204 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 MTERF3Q96E29 417 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 THOC1Q96FV9 657 aaKnown RBP14.37□□□□□ -0.11
LINC01220-201ENST00000558575 TEX37Q96LM6 180 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF354BQ96LW1 612 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 BBS4Q96RK4 519 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 CCDC134Q9H6E4 229 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 AIG1Q9NVV5 245 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 SH3BP4Q9P0V3 963 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 GPR45Q9Y5Y3 372 aa14.37□□□□□ -0.11
LINC01220-201ENST00000558575 KLHL41O60662 606 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 NME6O75414 186 aaPredicted RBP14.36□□□□□ -0.11
LINC01220-201ENST00000558575 F10P00742 488 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 EFNA1P20827 205 aaPredicted RBP14.36□□□□□ -0.11
LINC01220-201ENST00000558575 PRPS1L1P21108 318 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 MPIP34949 423 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 UFM1P61960 85 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 PHC1P78364 1004 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 EXOSC7Q15024 291 aaKnown RBP14.36□□□□□ -0.11
LINC01220-201ENST00000558575 PLEKHN1Q494U1 663 aaPredicted RBP14.36□□□□□ -0.11
LINC01220-201ENST00000558575 NXNQ6DKJ4 435 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 CGB2Q6NT52 195 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 HSDL2Q6YN16 418 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 ZNF551Q7Z340 670 aaPredicted RBP14.36□□□□□ -0.11
LINC01220-201ENST00000558575 SAMD14Q8IZD0 417 aaPredicted RBP14.36□□□□□ -0.11
LINC01220-201ENST00000558575 BEST3Q8N1M1 668 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 OR8K3Q8NH51 312 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 CEP70Q8NHQ1 597 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 RFWD2Q8NHY2 731 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 HAS2Q92819 552 aa14.36□□□□□ -0.11
LINC01220-201ENST00000558575 BRINP2Q9C0B6 783 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms