RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 FAM72DQ6L9T8 149 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 TPRG1Q6ZUI0 275 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 C12orf40Q86WS4 652 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 FAM72BQ86X60 149 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 ZNF100Q8IYN0 542 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 OR13J1Q8NGT2 312 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 PIP5K1AQ99755 562 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 MYNNQ9NPC7 610 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 MYO10Q9HD67 2058 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 KLF11O14901 512 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 MAGEB1P43366 347 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 PLGLAQ15195 96 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 SLC27A4Q6P1M0 643 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 ZNF767PQ75MW2 155 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 PROKR1Q8TCW9 393 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 PCNPQ8WW12 178 aaKnown RBP13.33□□□□□ -0.28
SPG11-210ENST00000558319 ARL11Q969Q4 196 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 GPR22Q99680 433 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 RFPL3O75679 317 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 LIPCP11150 499 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 IFNGR1P15260 489 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 ITPRIPL2Q3MIP1 535 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 MEDAGQ5VYS4 303 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 TMEM205Q6UW68 189 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
SPG11-210ENST00000558319 FAXDC2Q96IV6 333 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 SHDQ96IW2 340 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 OR2M4Q96R27 311 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 MITFO75030 526 aaPredicted RBP13.32□□□□□ -0.28
SPG11-210ENST00000558319 KNG1P01042 644 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 C14orf28Q4W4Y0 310 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 CNOT9Q92600 299 aaKnown RBP13.32□□□□□ -0.28
SPG11-210ENST00000558319 SNAPC3Q92966 411 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 CCDC32Q9BV29 185 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 CD244Q9BZW8 370 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 ZNF696Q9H7X3 374 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 CCM2LQ9NUG4 571 aaPredicted RBP13.32□□□□□ -0.28
SPG11-210ENST00000558319 ICKQ9UPZ9 632 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 TGM6O95932 706 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 ARAFP10398 606 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 OR2T33Q8NG76 320 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 LRR1Q96L50 414 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 RAB11FIP5Q9BXF6 653 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 DNAJC5Q9H3Z4 198 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 OR6C2Q9NZP2 312 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 PRSS51A0A1B0GVH4 220 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 UNC119BA6NIH7 251 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 M6PRP20645 277 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 STK11Q15831 433 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 KCTD20Q7Z5Y7 419 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 BBS1Q8NFJ9 593 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 KIAA1143Q96AT1 154 aaPredicted RBP13.32□□□□□ -0.28
SPG11-210ENST00000558319 SUSD3Q96L08 255 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 PEBP4Q96S96 227 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 VRK1Q99986 396 aaPredicted RBP13.32□□□□□ -0.28
SPG11-210ENST00000558319 F5H5P2 479 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 RNGTTO60942 597 aaKnown RBP13.32□□□□□ -0.28
SPG11-210ENST00000558319 CDK1P06493 297 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 BDKRB2P30411 391 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 JAG1P78504 1218 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 SLAMF9Q96A28 289 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 EFCAB11Q9BUY7 163 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 CRTAC1Q9NQ79 661 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 TTLL8A6PVC2 850 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 COQ9O75208 318 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 UPK1BO75841 260 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 ETV5P41161 510 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 AFF3P51826 1226 aaKnown RBP13.32□□□□□ -0.28
SPG11-210ENST00000558319 NTHL1P78549 312 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 BEX5Q5H9J7 111 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 GPR149Q86SP6 731 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 NIPA2Q8N8Q9 360 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 SDSLQ96GA7 329 aa13.32□□□□□ -0.28
SPG11-210ENST00000558319 KDM4FA0A1W2PPD8 638 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 A6NIN4 97 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 F10P00742 488 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 GALTP07902 379 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 SFTPDP35247 375 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 DLSTP36957 453 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 FXYD4P59646 89 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 MAP4K2Q12851 820 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 LMAN2Q12907 356 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 NPRL3Q12980 569 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 NDUFAF5Q5TEU4 345 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 TRIM46Q7Z4K8 759 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 IQCF1Q8N6M8 205 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 OR9A1PQ8NGU1 263 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 POTEKPQ9BYX7 375 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 SMIM3Q9BZL3 60 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 C19orf12Q9NSK7 152 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 SERTAD4Q9NUC0 356 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 PPP4R1LQ9P1A2 415 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 BACE2Q9Y5Z0 518 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 GXYLT2A0PJZ3 443 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 MTMR11A4FU01 709 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 LYRM1O43325 122 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 ZNF821O75541 412 aaPredicted RBP13.31□□□□□ -0.28
SPG11-210ENST00000558319 RORAP35398 523 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 GRIA2P42262 883 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 ART1P52961 327 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms