RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 NINQ8N4C6 2090 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 C2orf78A6NCI8 922 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 DRGXA6NNA5 263 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 POM121CA8CG34 1229 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 H3BNC9 293 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 QSOX1O00391 747 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 PRMT3O60678 531 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 CFDP00746 253 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 PLATP00750 562 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ADAP00813 363 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 BPIP17213 487 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ELK1P19419 428 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 TYMPP19971 482 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SOX18P35713 384 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 CLCNKAP51800 687 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 GBX2P52951 348 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 RHOAP61586 193 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SNRPGP62308 76 aaKnown RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 HBA1P69905 142 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 TAF10Q12962 218 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ZNF177Q13360 481 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 NFATC2Q13469 925 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 CHRNA6Q15825 494 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 LGALSLQ3ZCW2 172 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 RPS26P11Q5JNZ5 115 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 CLVS2Q5SYC1 327 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 RNF219Q5W0B1 726 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 FAM180BQ6P0A1 224 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 LRRC70Q7Z2Q7 622 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 KANSL1Q7Z3B3 1105 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 GPR155Q7Z3F1 870 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 DDX53Q86TM3 631 aaKnown RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ADGRG3Q86Y34 549 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SLC30A8Q8IWU4 369 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ADGRF3Q8IZF5 1079 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 CPA6Q8N4T0 437 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ATAD1Q8NBU5 361 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 OR2T35Q8NGX2 323 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 HUS1BQ8NHY5 278 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 CIDECQ96AQ7 238 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 RNFT2Q96EX2 444 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SLC6A18Q96N87 628 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ERMAPQ96PL5 475 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SEPT5Q99719 369 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ATF6BQ99941 703 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 LINC00597Q9H2U6 94 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 DPAGT1Q9H3H5 408 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 CCSER2Q9H7U1 834 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 NT5DC2Q9H857 520 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ZFYVE1Q9HBF4 777 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 EMC7Q9NPA0 242 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 THSD1Q9NS62 852 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 GPR52Q9Y2T5 361 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 TRPV2Q9Y5S1 764 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SCN5AQ14524 2016 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 GLYATL1P3A0A0U1RQE8 302 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 RPS10-NUDT3A0A1W2PQS6 291 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 C1orf226A1L170 272 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 HEPACAM2A8MVW5 462 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SAP18O00422 153 aaKnown RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 LANCL1O43813 399 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 BNIP3LO60238 219 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 MPC2O95563 127 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 HLA-DQB1P01920 261 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ASGR2P07307 311 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ACSM4P0C7M7 580 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 OR56A5P0C7T3 313 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 FAM157BP0CG42 384 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 TPMTP51580 245 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 TSPAN5P62079 268 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 BTG1P62324 171 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 KCNC3Q14003 757 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 GINS1Q14691 196 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SEC23BQ15437 767 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 MPPE1Q53F39 396 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 GPRC6AQ5T6X5 926 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 RAET1GQ6H3X3 334 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ADNP2Q6IQ32 1131 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 METAP1DQ6UB28 335 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 CEACAM20Q6UY09 585 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 QSOX2Q6ZRP7 698 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 RNF165Q6ZSG1 346 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 TRILQ7L0X0 811 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SZRD1Q7Z422 152 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 MEX3DQ86XN8 651 aaKnown RBP4.8□□□□□ -1.64
HMG20A-204ENST00000558288 MS4A15Q8N5U1 240 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 TTC9BQ8N6N2 239 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 OR6M1Q8NGM8 313 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 MARC2Q969Z3 335 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 EID2BQ96D98 161 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SGTBQ96EQ0 304 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ASIC4Q96FT7 647 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 ART5Q96L15 291 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 C12orf66Q96MD2 445 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SORCS2Q96PQ0 1159 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 RBP7Q96R05 134 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 GSX2Q9BZM3 304 aa4.8□□□□□ -1.64
HMG20A-204ENST00000558288 SAP130Q9H0E3 1048 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms