RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SPG11Q96JI7 2443 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 A0A087WUV0 522 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 ACOX3O15254 700 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 ERAL1O75616 437 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 CTAG2O75638 210 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 PPM1BO75688 479 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 BCAS2O75934 225 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 LRATO95237 230 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 KRT6AP02538 564 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 KRT6BP04259 564 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 ATP1B1P05026 303 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 ABCB1P08183 1280 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 SNRPAP09012 282 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 TAC1P20366 129 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 BMP5P22003 454 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 ABCD3P28288 659 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 MAGEA12P43365 314 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 KRT6CP48668 564 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 ASCL1P50553 236 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 ART1P52961 327 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 DLX5P56178 289 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 TRA2BP62995 288 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 CRYZQ08257 329 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 TRAF3Q13114 568 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 SNTA1Q13424 505 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 RCAN2Q14206 197 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 ACSF3Q4G176 576 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 GLE1Q53GS7 698 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 TEX35Q5T0J7 233 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 TIGD3Q6B0B8 471 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 VASNQ6EMK4 673 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 SLC30A6Q6NXT4 461 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 KIF18BQ86Y91 864 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 SAMD14Q8IZD0 417 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 CNPY4Q8N129 248 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 TMEM41AQ96HV5 264 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 LCORQ96JN0 433 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 POLDIP3Q9BY77 421 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 CDC42EP4Q9H3Q1 356 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 ZBTB26Q9HCK0 441 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 VPS29Q9UBQ0 182 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 PRODH2Q9UF12 536 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 NFU1Q9UMS0 254 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 CAMK2AQ9UQM7 478 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 C15orf41Q9Y2V0 281 aa12.46□□□□□ -0.41
SNRPA1-204ENST00000558020 TRIM49D1C9J1S8 452 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 ESRRBO95718 433 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 ACTL6AO96019 429 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 PDYNP01213 254 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 CT62P0C5K7 136 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 HSD3B1P14060 373 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 S1PR1P21453 382 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 DRD5P21918 477 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 GPX3P22352 226 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 HSD3B2P26439 372 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 DNAJA1P31689 397 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 CEACAM8P31997 349 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 FEN1P39748 380 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 ALDH9A1P49189 494 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 PRICKLE4Q2TBC4 344 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 NHSL2Q5HYW2 709 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 NSUN5P2Q63ZY6 315 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 LCA5Q86VQ0 697 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 ZZZ3Q8IYH5 903 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 MMGT1Q8N4V1 131 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 CHDHQ8NE62 594 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 GOT1L1Q8NHS2 421 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 FAM222BQ8WU58 562 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 NINJ1Q92982 152 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 RNASE6Q93091 150 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 ABTB1Q969K4 478 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 KLHL29Q96CT2 875 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 NSUN5Q96P11 429 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 C1QTNF3Q9BXJ4 246 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 PRDM14Q9GZV8 571 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 NXF5Q9H1B4 397 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 UBQLN3Q9H347 655 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 CALHM2Q9HA72 323 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 FETUBQ9UGM5 382 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 TRPS1Q9UHF7 1281 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 CES1P1Q9UKY3 287 aa12.45□□□□□ -0.42
SNRPA1-204ENST00000558020 A0A1W2PS29 197 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 CCDC151A5D8V7 595 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 CD8B2A6NJW9 211 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 ULK1O75385 1050 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 CBR3O75828 277 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 RPS17P08708 135 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 RHOXF2BP0C7M4 288 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 DRD2P14416 443 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 OPRM1P35372 400 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 HSD17B3P37058 310 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 PPICP45877 212 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 CDH13P55290 713 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 PSPHP78330 225 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 RASA2Q15283 850 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 FBXL19-AS1Q494R0 122 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 BICRALQ6AI39 1079 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 TMEM81Q6P7N7 255 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 SCIMPQ6UWF3 145 aa12.44□□□□□ -0.42
SNRPA1-204ENST00000558020 ANGPTL8Q6UXH0 198 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms