RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 VPS50Q96JG6 964 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 MAGED4Q96JG8 741 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 C7orf34Q96L11 122 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 CCDC3Q9BQI4 270 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 BDH2Q9BUT1 245 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 C9orf16Q9BUW7 83 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 CHRNA10Q9GZZ6 450 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 RAD21L1Q9H4I0 556 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 ANKRA2Q9H9E1 313 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 A4GALTQ9NPC4 353 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 IL1RAPQ9NPH3 570 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 UBAP1Q9NZ09 502 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 TMEM9Q9P0T7 183 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 SEMA5BQ9P283 1151 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 DNAJB9Q9UBS3 223 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 RPS6KA6Q9UK32 745 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 RAB26Q9ULW5 256 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 PADI4Q9UM07 663 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 ABCG2Q9UNQ0 655 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 SAMD4AQ9UPU9 718 aaKnown RBP6.92□□□□□ -1.3
SPG11-204ENST00000557866 ENTPD4Q9Y227 616 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 NAALAD2Q9Y3Q0 740 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 AP4B1Q9Y6B7 739 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 U3KQA8 63 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 FANCMQ8IYD8 2048 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 SNRNP200O75643 2136 aaKnown RBP6.92□□□□□ -1.3
SPG11-204ENST00000557866 CACNA1IQ9P0X4 2223 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 TECTAO75443 2155 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 MYOCOSA0A1B0GUC4 107 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 H3BMH7 237 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 hCG_2039718K7EN88 272 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 M0QX08 132 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 TXNDC9O14530 226 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 EI24O14681 340 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 CHST10O43529 356 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 FGF17O60258 216 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 SRPX2O60687 465 aaPredicted RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 RDH16O75452 317 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 CST1P01037 141 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 OPN1SWP03999 348 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 TFPTP0C1Z6 253 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 OR12D1P0DN82 309 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 GNSP15586 552 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 TNFRSF1BP20333 461 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 CD247P20963 164 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 MATN1P21941 496 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 CD1CP29017 333 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 BUD31P41223 144 aaPredicted RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 MC3RP41968 323 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 PRIM2P49643 509 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 XKP51811 444 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 PRKAG1P54619 331 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 SHC2P98077 582 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 VLDLRP98155 873 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 FUT5Q11128 374 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 PPP1R8Q12972 351 aaKnown RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 TP53BP2Q13625 1128 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 KCNAB1Q14722 419 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 ZNF630Q2M218 657 aaPredicted RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 HLA-BQ31612 363 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 INAVAQ3KP66 663 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 AMZ1Q400G9 498 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.91□□□□□ -1.3
SPG11-204ENST00000557866 ZC3H12BQ5HYM0 836 aaKnown RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 CRB2Q5IJ48 1285 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 OR52E8Q6IFG1 317 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 UGT2A3Q6UWM9 527 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 USP53Q70EK8 1073 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 OLIG3Q7RTU3 272 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 C11orf74Q86VG3 221 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 GATAD2AQ86YP4 633 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 ZDHHC21Q8IVQ6 265 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 MARVELD2Q8N4S9 558 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 PACRGLQ8N7B6 248 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 Q8N9G6 341 aaPredicted RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 SIMC1Q8NDZ2 872 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 OR7G2Q8NG99 324 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 GPR32P1Q8NGA4 272 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 OR4K14Q8NGD5 310 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 OR5D16Q8NGK9 328 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 OR9A4Q8NGU2 314 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 ZFP28Q8NHY6 868 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 SAP25Q8TEE9 199 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 DOK4Q8TEW6 326 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 N4BP2L2Q92802 583 aaPredicted RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 KAT2AQ92830 837 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 POP5Q969H6 163 aaKnown RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 ANKRD9Q96BM1 317 aaPredicted RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 TBC1D20Q96BZ9 403 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 OTUB1Q96FW1 271 aaPredicted RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 TMEM19Q96HH6 336 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 ZC3H10Q96K80 434 aaKnown RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 SLC35G5Q96KT7 338 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 CD180Q99467 661 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 BARD1Q99728 777 aaKnown RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 YIPF4Q9BSR8 244 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 DOHHQ9BU89 302 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 NPLQ9BXD5 320 aaPredicted RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 SPRTNQ9H040 489 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms