RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 H0YL77 283 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 GOLGA8SH3BPF8 625 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 SLC1A7O00341 560 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 RNF13O43567 381 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 TSPAN2O60636 221 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 N4BP1O75113 896 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 TSPAN12O95859 305 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 IGHV4-39P01824 125 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 NR3C1P04150 777 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 F7P08709 466 aaPredicted RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 HOXC6P09630 235 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 TMEM191BP0C7N4 346 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 HSMCR30P0CW71 290 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 PRF1P14222 555 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 AADACP22760 399 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 PROZP22891 400 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 LAP3P28838 519 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 CDC25AP30304 524 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 NMT1P30419 496 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 EPS15P42566 896 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 OR1G1P47890 313 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 CD151P48509 253 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 CCT3P49368 545 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 PCYT1AP49585 367 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 FHITP49789 147 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 FUT6P51993 359 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 LBX1P52954 281 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 CARD18P57730 90 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 MRPS6P82932 125 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 SPAG1Q07617 926 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 DLG1Q12959 904 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 SRSF9Q13242 221 aaKnown RBP eCLIP3.37□□□□□ -1.87
TDP1-217ENST00000557782 GPR17Q13304 367 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 DOC2AQ14183 400 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 NFATC4Q14934 902 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 EXT1Q16394 746 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 MAPK6Q16659 721 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 DUSP5Q16690 384 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 HAGHQ16775 308 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 ZNF699Q32M78 642 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 SPATS1Q496A3 300 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 XKR6Q5GH73 641 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 SLC25A53Q5H9E4 307 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 PDSS1Q5T2R2 415 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 LRRC66Q68CR7 880 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 IGFL4Q6B9Z1 124 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 TTC19Q6DKK2 380 aaPredicted RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 STEAP1BQ6NZ63 245 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 COLCA1Q6ZS62 124 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 KCTD8Q6ZWB6 473 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 CENPQQ7L2Z9 268 aaPredicted RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 NLRP9Q7RTR0 991 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 MRPL10Q7Z7H8 261 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 GGNQ86UU5 652 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 TMEM123Q8N131 208 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 NANOGP1Q8N7R0 232 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 FAM98AQ8NCA5 519 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 C17orf47Q8NEP4 570 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 BPIFCQ8NFQ6 507 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 OLIG1Q8TAK6 271 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 FAM81AQ8TBF8 368 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 M1APQ8TC57 530 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 RPL3LQ92901 407 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 MRPL24Q96A35 216 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 UPRTQ96BW1 309 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 SH3YL1Q96HL8 342 aaPredicted RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 ELMO2Q96JJ3 720 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 C7orf34Q96L11 122 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 RHNO1Q9BSD3 238 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 LRRC1Q9BTT6 524 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 DCTPP1Q9H773 170 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 ZFP14Q9HCL3 533 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 POT1Q9NUX5 634 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 SMOXQ9NWM0 555 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 OCIAD1Q9NX40 245 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 GPR83Q9NYM4 423 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 NLGN3Q9NZ94 848 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 KLRF1Q9NZS2 232 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 LCMT1Q9UIC8 334 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 GSTK1Q9Y2Q3 226 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 MRPL11Q9Y3B7 192 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 SELENOKQ9Y6D0 94 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 MAD1L1Q9Y6D9 718 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 CGNL1Q0VF96 1302 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 IGLV9-49A0A0B4J1Y8 123 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 A0A1B0GTQ1 180 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ASPDHA6ND91 283 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 SHISA7A6NL88 538 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 H3BMH7 237 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 BTN3A3O00478 584 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 POLR3GO15318 223 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 DUX1O43812 170 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 TIMM8AO60220 97 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 CDH16O75309 829 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 TRIM3O75382 744 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 FLOT1O75955 427 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 NXPH2O95156 264 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 OTCP00480 354 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 KRT6AP02538 564 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 TPSB2P20231 275 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms