RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SLC9B1Q4ZJI4 515 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 TMEM64Q6YI46 380 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 DGAT2L6Q6ZPD8 337 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 LINC00696Q6ZRV3 163 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 MSANTD1Q6ZTZ1 278 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 FAM47EQ6ZV65 393 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 C9orf40Q8IXQ3 194 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 KIF2BQ8N4N8 673 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 RBMXL3Q8N7X1 1067 aaKnown RBP12.69□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF441Q8N8Z8 693 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 GOLM1Q8NBJ4 401 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 TMEM178AQ8NBL3 297 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 C16orf52Q8NHV5 167 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 GFM2Q969S9 779 aaKnown RBP12.69□□□□□ -0.38
SHMT2-234ENST00000557703 SECISBP2Q96T21 854 aaKnown RBP12.69□□□□□ -0.38
SHMT2-234ENST00000557703 DDX18Q9NVP1 670 aaKnown RBP12.69□□□□□ -0.38
SHMT2-234ENST00000557703 FAM120CQ9NX05 1096 aaKnown RBP12.69□□□□□ -0.38
SHMT2-234ENST00000557703 GIN1Q9NXP7 522 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 PCDHGB4Q9UN71 923 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 MYOCOSA0A1B0GUC4 107 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 A8MVJ9 347 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 B8ZZF3 427 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 E9PBE3 544 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 TO15178 435 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 ABCB7O75027 752 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 SLC22A3O75751 556 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 PSMG1O95456 288 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 CBX7O95931 251 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 PDGFAP04085 211 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 CLPSP04118 112 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 KRT16P08779 473 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 CT62P0C5K7 136 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 CD46P15529 392 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 SSTR4P31391 388 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 CD96P40200 585 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 EMDP50402 254 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 RPP38P78345 283 aaKnown RBP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 TXNL4AP83876 142 aaKnown RBP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 C19orf57Q0VDD7 668 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 TUBA3CQ13748 450 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF169Q14929 603 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 ZNHIT3Q15649 155 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF750Q32MQ0 723 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 TRMT12Q53H54 448 aaKnown RBP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 FHL5Q5TD97 284 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 TUBA3EQ6PEY2 450 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 MAVSQ7Z434 540 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 BEST3Q8N1M1 668 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 MIER2Q8N344 545 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 OR7A2PQ8NGA2 310 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 OR9A2Q8NGT5 310 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 CLHC1Q8NHS4 586 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 ASB15Q8WXK1 588 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 ADIPOR1Q96A54 375 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 LCORQ96JN0 433 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 BTBD9Q96Q07 612 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 RASL10BQ96S79 203 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 NPAS2Q99743 824 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 HHATLQ9HCP6 504 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 SLAMF7Q9NQ25 335 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 HPF1Q9NWY4 346 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 LRFN1Q9P244 771 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 GIMAP2Q9UG22 337 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 BCAP29Q9UHQ4 241 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 HEMK1Q9Y5R4 338 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 NUP214P35658 2090 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-234ENST00000557703 CFAP46Q8IYW2 2715 aa12.68□□□□□ -0.38
SHMT2-234ENST00000557703 FRG2CA6NGY1 282 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 UPK1AO00322 258 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 EMC8O43402 210 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 OR2J2O76002 312 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 VIMP08670 466 aaKnown RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 ALDOCP09972 364 aaKnown RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 LAMP1P11279 417 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 S100A3P33764 101 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 GPC1P35052 558 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 MAGEA8P43361 318 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 MRPS22P82650 360 aaKnown RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 GUCY1A3Q02108 690 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 NFATC3Q12968 1075 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 CYP27C1Q4G0S4 372 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 SLC6A19Q695T7 634 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 FAM111BQ6SJ93 734 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 KRTCAP2Q8N6L1 136 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 FAM98AQ8NCA5 519 aaKnown RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 MDS2Q8NDY4 140 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 ADCY4Q8NFM4 1077 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 OR52R1Q8NGF1 315 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 OR56A1Q8NGH5 318 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 DNAJB8Q8NHS0 232 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 SFXN5Q8TD22 340 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 TSPEARQ8WU66 669 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 HOXB13Q92826 284 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 C5orf34Q96MH7 638 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 BBC3Q96PG8 261 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 OR52B2Q96RD2 323 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 TIMMDC1Q9NPL8 285 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 BTNL2Q9UIR0 455 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms