RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 POLHQ9Y253 713 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 DOCK6Q96HP0 2047 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 SLC28A2O43868 658 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 SLC19A2O60779 497 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 DGKEP52429 567 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 RPS25P62851 125 aaKnown RBP15.39■□□□□ 0.05
SHMT2-232ENST00000557487 SNAPC1Q16533 368 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 TCTN1Q2MV58 587 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 ZNF805Q5CZA5 627 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 PRAMEF14Q5SWL7 426 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 IER5LQ5T953 404 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 PRAMEF13Q5VWM6 474 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 KHDRBS2Q5VWX1 349 aaKnown RBP15.39■□□□□ 0.05
SHMT2-232ENST00000557487 FAM129CQ86XR2 697 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 OR52P1PQ8NH57 321 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 TM4SF18Q96CE8 201 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 RNFT2Q96EX2 444 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 LINC00615Q96LM1 132 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-232ENST00000557487 PRRC1Q96M27 445 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 CAMK1GQ96NX5 476 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 PELI2Q9HAT8 420 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 BCL2L10Q9HD36 194 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.39■□□□□ 0.05
SHMT2-232ENST00000557487 PCDH10Q9P2E7 1040 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 ADAM29Q9UKF5 820 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 KIF26AQ9ULI4 1882 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-232ENST00000557487 CASKO14936 926 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 LYRM1O43325 122 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 LEFTY1O75610 366 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 HLA-DPB1P04440 258 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 ELFN1P0C7U0 828 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 FAM157BP0CG42 384 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 CSF2RAP15509 400 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 MMP11P24347 488 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 MMP12P39900 470 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 NNMTP40261 264 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 EVX1P49640 407 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 TSTA3Q13630 321 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-232ENST00000557487 Q5BKY6 102 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 CNIH2Q6PI25 160 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 WDR53Q7Z5U6 358 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-232ENST00000557487 ZER1Q7Z7L7 766 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 PDZD3Q86UT5 571 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 SLC39A11Q8N1S5 342 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 TEX47Q8TBZ9 253 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 ACOT12Q8WYK0 555 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 RFKQ969G6 155 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 ZNF558Q96NG5 402 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 TREX2Q9BQ50 279 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-232ENST00000557487 TMEM43Q9BTV4 400 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 SIRT3Q9NTG7 399 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-232ENST00000557487 ASB6Q9NWX5 421 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 FBXW2Q9UKT8 454 aa15.39■□□□□ 0.05
SHMT2-232ENST00000557487 FAM240BA0A1B0GVZ2 78 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 KDM4EB2RXH2 506 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-232ENST00000557487 CASC3O15234 703 aaKnown RBP15.38■□□□□ 0.05
SHMT2-232ENST00000557487 NDUFB5O43674 189 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 CSF2P04141 144 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 CCNYL3P0C7X3 344 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 PBLDP30039 288 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-232ENST00000557487 OPRD1P41143 372 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 MTNR1AP48039 350 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 VASPP50552 380 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-232ENST00000557487 CCL23P55773 120 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 BTG1P62324 171 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 TRA2BP62995 288 aaKnown RBP15.38■□□□□ 0.05
SHMT2-232ENST00000557487 MAB21L1Q13394 359 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 ANGPT1Q15389 498 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 CCDC58Q4VC31 144 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 PRAMEF8Q5VWM4 474 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 PRAMEF7Q5VXH5 474 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 BICRALQ6AI39 1079 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 SLC27A4Q6P1M0 643 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 LIPIQ6XZB0 460 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 TMC8Q8IU68 726 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 TRIM48Q8IWZ4 208 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 CFAP206Q8IYR0 622 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 IQCF1Q8N6M8 205 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 MORN4Q8NDC4 146 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 OR4D11Q8NGI4 311 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 GNPDA2Q8TDQ7 276 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 TMEM203Q969S6 136 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 KCNJ15Q99712 375 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 TEX12Q9BXU0 123 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 SPNS1Q9H2V7 528 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 NT5DC2Q9H857 520 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 IL23AQ9NPF7 189 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 SLAMF7Q9NQ25 335 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 IL36AQ9UHA7 158 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 ALG5Q9Y673 324 aa15.38■□□□□ 0.05
SHMT2-232ENST00000557487 PLPP1O14494 284 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 AKAP8O43823 692 aaKnown RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 LILRB5O75023 590 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 CXCL10P02778 98 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 EPHX1P07099 455 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 KELP23276 732 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 PKLRP30613 574 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 NUDT1P36639 197 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 CCT3P49368 545 aaKnown RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 MAN2A2P49641 1150 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms