RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MMGT1Q8N4V1 131 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 TNIP2Q8NFZ5 429 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 SELENOMQ8WWX9 145 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 TM4SF18Q96CE8 201 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 NTNG2Q96CW9 530 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 LRRC46Q96FV0 321 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 TMEM41AQ96HV5 264 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 NXF5Q9H1B4 397 aaKnown RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 MRPL46Q9H2W6 279 aaKnown RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 BRF2Q9HAW0 419 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 FARSBQ9NSD9 589 aaKnown RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 DNAJB12Q9NXW2 375 aaKnown RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 ZNF629Q9UEG4 869 aaPredicted RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 DMGDHQ9UI17 866 aaKnown RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 ZNF180Q9UJW8 692 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 SNX6Q9UNH7 406 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 C15orf41Q9Y2V0 281 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 A0A1B0GTL3 188 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 TRIM49D1C9J1S8 452 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 PPP6CO00743 305 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 ERAL1O75616 437 aaKnown RBP14.53□□□□□ -0.08
TUBB3-213ENST00000557262 CTAG2O75638 210 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 IL2RAP01589 272 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 ATP1B1P05026 303 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 RPS17P08708 135 aaKnown RBP14.53□□□□□ -0.08
TUBB3-213ENST00000557262 DNAJA1P31689 397 aaKnown RBP14.53□□□□□ -0.08
TUBB3-213ENST00000557262 UQCRC1P31930 480 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 FEN1P39748 380 aaKnown RBP14.53□□□□□ -0.08
TUBB3-213ENST00000557262 ART1P52961 327 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 CDH13P55290 713 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 GALNT1Q10472 559 aaPredicted RBP14.53□□□□□ -0.08
TUBB3-213ENST00000557262 TOMM20Q15388 145 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 WHAMMP3Q1A5X7 153 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 ACSF3Q4G176 576 aaPredicted RBP14.53□□□□□ -0.08
TUBB3-213ENST00000557262 NHSL2Q5HYW2 709 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 TIGD3Q6B0B8 471 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 FAM111BQ6SJ93 734 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 NUP54Q7Z3B4 507 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 LACC1Q8IV20 430 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 ZZZ3Q8IYH5 903 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 VWA5B2Q8N398 1253 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 TMEM151AQ8N4L1 468 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 NAXEQ8NCW5 288 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 ZNF483Q8TF39 744 aaPredicted RBP14.53□□□□□ -0.08
TUBB3-213ENST00000557262 DCAKDQ8WVC6 231 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 IFT81Q8WYA0 676 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 HSPBAP1Q96EW2 488 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 C1QTNF3Q9BXJ4 246 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 BRINP2Q9C0B6 783 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 PRDM14Q9GZV8 571 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 MAT2BQ9NZL9 334 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 BCAP29Q9UHQ4 241 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 ZNF639Q9UID6 485 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 DTX4Q9Y2E6 619 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 SLC6A5Q9Y345 797 aa14.53□□□□□ -0.08
TUBB3-213ENST00000557262 GNB5O14775 395 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 PPM1BO75688 479 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 FREM3P0C091 2139 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 SBK3P0C264 359 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 BMP7P18075 431 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 TSPAN8P19075 237 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 BMP5P22003 454 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 HSD17B3P37058 310 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 ASCL1P50553 236 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 TRA2BP62995 288 aaKnown RBP14.52□□□□□ -0.09
TUBB3-213ENST00000557262 SNTB1Q13884 538 aaKnown RBP14.52□□□□□ -0.09
TUBB3-213ENST00000557262 EIPR1Q53HC9 387 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 WIPI1Q5MNZ9 446 aaPredicted RBP14.52□□□□□ -0.09
TUBB3-213ENST00000557262 NSUN5P2Q63ZY6 315 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 SLC30A6Q6NXT4 461 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 LETMD1Q6P1Q0 360 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 TMEM81Q6P7N7 255 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 RELL2Q8NC24 303 aaPredicted RBP14.52□□□□□ -0.09
TUBB3-213ENST00000557262 OR1J4Q8NGS1 313 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 NRGNQ92686 78 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 CTHRC1Q96CG8 243 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 LCORQ96JN0 433 aaPredicted RBP14.52□□□□□ -0.09
TUBB3-213ENST00000557262 FMO2Q99518 471 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 FAIM2Q9BWQ8 316 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 POLDIP3Q9BY77 421 aaKnown RBP14.52□□□□□ -0.09
TUBB3-213ENST00000557262 METTL7AQ9H8H3 244 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 FETUBQ9UGM5 382 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 TRPS1Q9UHF7 1281 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 FOXD3Q9UJU5 478 aaPredicted RBP14.52□□□□□ -0.09
TUBB3-213ENST00000557262 CAMK2AQ9UQM7 478 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 ARHGAP21Q5T5U3 1957 aa14.52□□□□□ -0.09
TUBB3-213ENST00000557262 FAM221AA4D161 298 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 CD8B2A6NJW9 211 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 A8MT66 165 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 KDM4EB2RXH2 506 aaPredicted RBP14.51□□□□□ -0.09
TUBB3-213ENST00000557262 ACOX3O15254 700 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 ICOSLGO75144 302 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 OR4F21O95013 312 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 SNRPAP09012 282 aaKnown RBP14.51□□□□□ -0.09
TUBB3-213ENST00000557262 DRD5P21918 477 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 PTPN6P29350 595 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 PPICP45877 212 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 IST1P53990 364 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 WNT3P56703 355 aa14.51□□□□□ -0.09
TUBB3-213ENST00000557262 DCAF7P61962 342 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms