RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 DRD5P21918 477 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 NTSP30990 170 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 RPL3P39023 403 aaKnown RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 EMDP50402 254 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 NCBP2P52298 156 aaKnown RBP eCLIP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 NRG3P56975 720 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 MRPS35P82673 323 aaKnown RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 EMX2Q04743 252 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 ELOAQ14241 798 aaKnown RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 EXOSC7Q15024 291 aaKnown RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 LTB4RQ15722 352 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 PDCD2Q16342 344 aaPredicted RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 KRTCAP3Q53RY4 240 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 TTMPQ5BVD1 217 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 IL23RQ5VWK5 629 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 SLC22A10Q63ZE4 541 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 R3HCC1LQ7Z5L2 792 aaKnown RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 LRRC34Q8IZ02 419 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 LIX1Q8N485 282 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 PSD4Q8NDX1 1056 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 OR9A2Q8NGT5 310 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 KAT2AQ92830 837 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 GFM2Q969S9 779 aaKnown RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 PPCDCQ96CD2 204 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 LCORQ96JN0 433 aaPredicted RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 AMDHD1Q96NU7 426 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 SLX1AQ9BQ83 275 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 AKTIPQ9H8T0 292 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 PNPOQ9NVS9 261 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 TAS2R9Q9NYW1 312 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 NOP53Q9NZM5 478 aaKnown RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 SH3BP4Q9P0V3 963 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 GIMAP2Q9UG22 337 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 NPFFR2Q9Y5X5 522 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 A0A087WV62 115 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 ANKUB1A6NFN9 424 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 PLOD2O00469 737 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 ACOX3O15254 700 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 AKAP10O43572 662 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 LRATO95237 230 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 P04436 131 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 IFI6P09912 130 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 NAGAP17050 411 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 GPX3P22352 226 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 MST1P26927 711 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 PTGER1P34995 402 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 PPICP45877 212 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 MEOX1P50221 254 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 TDGF1P3P51864 188 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 PMP22Q01453 160 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 ALDH6A1Q02252 535 aaKnown RBP9.86□□□□□ -0.83
LINC00239-201ENST00000556973 DUSP8Q13202 625 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 MRPL49Q13405 166 aaKnown RBP9.86□□□□□ -0.83
LINC00239-201ENST00000556973 PDE7AQ13946 482 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 NTRK2Q16620 822 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 LYPD8Q6UX82 237 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 NATD1Q8N6N6 113 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 SIMC1Q8NDZ2 872 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 PAQR8Q8TEZ7 354 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF75CPQ92670 426 aaPredicted RBP9.86□□□□□ -0.83
LINC00239-201ENST00000556973 SPACA9Q96E40 222 aaPredicted RBP9.86□□□□□ -0.83
LINC00239-201ENST00000556973 ELP4Q96EB1 424 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 HSPBAP1Q96EW2 488 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 ZBED6CLQ96FA7 236 aaPredicted RBP9.86□□□□□ -0.83
LINC00239-201ENST00000556973 PPP1R36Q96LQ0 422 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 FRMD6Q96NE9 622 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 PRPF18Q99633 342 aaKnown RBP9.86□□□□□ -0.83
LINC00239-201ENST00000556973 C1orf50Q9BV19 199 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 NUF2Q9BZD4 464 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 ACBD3Q9H3P7 528 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 GLIPR2Q9H4G4 154 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 MEAF6Q9HAF1 191 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 SACM1LQ9NTJ5 587 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 ASIC5Q9NY37 505 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 CNIH4Q9P003 139 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 SEC14L3Q9UDX4 400 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 ATP6V1HQ9UI12 483 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 MAPRE3Q9UPY8 281 aa9.86□□□□□ -0.83
LINC00239-201ENST00000556973 TRPC5OSA6NMA1 111 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 HDAC3O15379 428 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 PDPK1O15530 556 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 COQ9O75208 318 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 G6PDP11413 515 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 LBPP18428 481 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 PRPS1L1P21108 318 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 ABCD3P28288 659 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 HPCAL1P37235 193 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 FRKP42685 505 aaPredicted RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 UQCRFS1P47985 274 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 TMED10P49755 219 aaKnown RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 MANFP55145 182 aaKnown RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 CLDN8P56748 225 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 PSPHP78330 225 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 OCRLQ01968 901 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 MLC1Q15049 377 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 EIF2S3LQ2VIR3 472 aaKnown RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 FHL5Q5TD97 284 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 ANKRD26P1Q6NSI1 321 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 TMEM107Q6UX40 140 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms