RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TRPS1Q9UHF7 1281 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 MCM8Q9UJA3 840 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 GRID1Q9ULK0 1009 aa6.77□□□□□ -1.33
SCFD1-222ENST00000556768 BOKQ9UMX3 212 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-222ENST00000556768 OR14I1A6ND48 311 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CYSRT1A8MQ03 144 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 GOLGA8RI6L899 631 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PGRMC2O15173 223 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PRKRAO75569 313 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ERAL1O75616 437 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PDYNP01213 254 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 RPS17P08708 135 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 MYL2P10916 166 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 TSPAN8P19075 237 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CSNK2A2P19784 350 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PTGER1P34995 402 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ALDH9A1P49189 494 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PRKAA2P54646 552 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PKNOX1P55347 436 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 SLC37A1P57057 533 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 TRA2BP62995 288 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 HSF1Q00613 529 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ACSM2AQ08AH3 577 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 LCP2Q13094 533 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 HEPACAMQ14CZ8 416 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF630Q2M218 657 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CCDC153Q494R4 210 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CMPK2Q5EBM0 449 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 RNFT1Q5M7Z0 435 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 SPDYAQ5MJ70 313 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF678Q5SXM1 525 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 TMEM198Q66K66 360 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ACSM2BQ68CK6 577 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 LETMD1Q6P1Q0 360 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 C9orf40Q8IXQ3 194 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 FAM109AQ8N4B1 249 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CCNYL1Q8N7R7 359 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 OR7G1Q8NGA0 311 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 FAM57AQ8TBR7 257 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 TP53INP1Q96A56 240 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 SPACA9Q96E40 222 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PLPPR2Q96GM1 343 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF382Q96SR6 550 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF717Q9BY31 904 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 TTTY12Q9BZ98 90 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 WWTR1Q9GZV5 400 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 IQCGQ9H095 443 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 IL1RL2Q9HB29 575 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PFDN4Q9NQP4 134 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 GIMAP4Q9NUV9 329 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 TMEM216Q9P0N5 145 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ACAD8Q9UKU7 415 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 TRIM33Q9UPN9 1127 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 MYO9AB2RTY4 2548 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CREBBPQ92793 2442 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 FAM166BA8MTA8 275 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 FAM47E-STBD1D6RA91 191 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 NPIPA2E9PIF3 369 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 NPIPA3F8WFD2 350 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 G3V3Y1 287 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 BCKDKO14874 412 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 DLX3O60479 287 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CDH16O75309 829 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 GLRA3O75311 464 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 OR4F21O95013 312 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CLDN14O95500 239 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ENO1P06733 434 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CPMP14384 443 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 COX6B1P14854 86 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 NR0B1P51843 470 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CSTF3Q12996 717 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 IMPG1Q17R60 797 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 FAM153CQ494X1 144 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 SPIN4Q56A73 249 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 SLC48A1Q6P1K1 146 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 LRFN4Q6PJG9 635 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 C3P1Q6ZMU1 363 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ACAD11Q709F0 780 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 RPS27LQ71UM5 84 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 SYT9Q86SS6 491 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 CD163Q86VB7 1156 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 VWA5B2Q8N398 1253 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 LIX1Q8N485 282 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 TMEM151AQ8N4L1 468 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 OR52N2Q8NGI0 321 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 OR5M3Q8NGP4 307 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PAQR8Q8TEZ7 354 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PHF10Q8WUB8 498 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ASB5Q8WWX0 329 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 RND1Q92730 232 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 DIO2Q92813 273 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 PMM1Q92871 262 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 SARAFQ96BY9 339 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 KLHL29Q96CT2 875 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 JSRP1Q96MG2 331 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 DOHHQ9BU89 302 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 OR10A5Q9H207 317 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ZDHHC11Q9H8X9 412 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 ZFP64Q9NPA5 681 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms