RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 CNR1P21554 472 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 NT5EP21589 574 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 GPX3P22352 226 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 GRNP28799 593 aaKnown RBP9.51□□□□□ -0.89
SHMT2-224ENST00000556737 ALDH3A1P30838 453 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 TIA1P31483 386 aaKnown RBP eCLIP9.51□□□□□ -0.89
SHMT2-224ENST00000556737 PIGAP37287 484 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 ETV4P43268 484 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 NAGLUP54802 743 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 PPIAP62937 165 aaKnown RBP9.51□□□□□ -0.89
SHMT2-224ENST00000556737 CDSNQ15517 529 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 NTRK2Q16620 822 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 SPIN4Q56A73 249 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 CFAP157Q5JU67 520 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 ATG16L1Q676U5 607 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 FAM180BQ6P0A1 224 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 MTFR2Q6P444 385 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 GALNT18Q6P9A2 607 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 SCIMPQ6UWF3 145 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 GK5Q6ZS86 529 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 C10orf107Q8IVU9 208 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 DND1Q8IYX4 353 aaKnown RBP9.51□□□□□ -0.89
SHMT2-224ENST00000556737 VWA5B2Q8N398 1253 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF808Q8N4W9 903 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-224ENST00000556737 TMEM251Q8N6I4 163 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 CCNYL1Q8N7R7 359 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 FAM57AQ8TBR7 257 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 CKAP2Q8WWK9 683 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 CTHRC1Q96CG8 243 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 KLHL29Q96CT2 875 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 NSRP1Q9H0G5 558 aaKnown RBP9.51□□□□□ -0.89
SHMT2-224ENST00000556737 OR10A5Q9H207 317 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 RABEP2Q9H5N1 569 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF703Q9H7S9 590 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-224ENST00000556737 MANSC1Q9H8J5 431 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 IL1RL2Q9HB29 575 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 MID1IP1Q9NPA3 183 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 NMRK1Q9NWW6 199 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 SIRT5Q9NXA8 310 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 HRH3Q9Y5N1 445 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 FBN2P35556 2912 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 ACOT7O00154 380 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 BIRC5O15392 142 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 CDC40O60508 579 aaKnown RBP eCLIP9.5□□□□□ -0.89
SHMT2-224ENST00000556737 GUCY1B2O75343 617 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 ERAL1O75616 437 aaKnown RBP9.5□□□□□ -0.89
SHMT2-224ENST00000556737 LRATO95237 230 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 IGHG3P01860 377 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 P04436 131 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 LSP1P33241 339 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 PTGS2P35354 604 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 FEN1P39748 380 aaKnown RBP9.5□□□□□ -0.89
SHMT2-224ENST00000556737 MAGEA5P43359 124 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 CASP6P55212 293 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 PLGLB1Q02325 96 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 MAP4K2Q12851 820 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 STX3Q13277 289 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 ART3Q13508 389 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 CEBPEQ15744 281 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF628Q5EBL2 1059 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 EMC4Q5J8M3 183 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 PRAMEF20Q5VT98 475 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 LIPMQ5VYY2 423 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 FAM111BQ6SJ93 734 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 TMEM64Q6YI46 380 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 C3P1Q6ZMU1 363 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 RGS9BPQ6ZS82 235 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 ZCCHC23Q6ZST2 131 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 FAM47EQ6ZV65 393 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 MRGPRGQ86SM5 289 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 CD163Q86VB7 1156 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 LRRC25Q8N386 305 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-224ENST00000556737 FAM109AQ8N4B1 249 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 MARVELD2Q8N4S9 558 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 C17orf47Q8NEP4 570 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 OR7G1Q8NGA0 311 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 C16orf78Q8WTQ4 265 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 PHF10Q8WUB8 498 aaKnown RBP9.5□□□□□ -0.89
SHMT2-224ENST00000556737 TP53INP1Q96A56 240 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 NTNG2Q96CW9 530 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 FAIM2Q9BWQ8 316 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 EBPLQ9BY08 206 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 ITPAQ9BY32 194 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 NXF5Q9H1B4 397 aaKnown RBP9.5□□□□□ -0.89
SHMT2-224ENST00000556737 DEFB127Q9H1M4 99 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 RYDENQ9NUL5 291 aaKnown RBP9.5□□□□□ -0.89
SHMT2-224ENST00000556737 OXSMQ9NWU1 459 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 DLGAP4Q9Y2H0 992 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 CCL27Q9Y4X3 112 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 ITPR2Q14571 2701 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 MYO7BQ6PIF6 2116 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF407Q9C0G0 2248 aa9.5□□□□□ -0.89
SHMT2-224ENST00000556737 GTF3C1Q12789 2109 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 A0A1B0GVC2 190 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 C2orf92A0A1B0GVN3 265 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 PRSS44E7EML9 344 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 E9PLN8 166 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 TRIM13O60858 407 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 RSL1D1O76021 490 aaKnown RBP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 PDE9AO76083 593 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms