RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CAPZBP47756 277 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 C21orf59P57076 290 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 ISL1P61371 349 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 LGI4Q8N135 537 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 CHDHQ8NE62 594 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 OR4C15Q8NGM1 316 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 SMIM31A0A1B0GVY4 71 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 H3BSA7 217 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 M0R3H8 397 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 FFAR1O14842 300 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 SEMA7AO75326 666 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 DNAJB5O75953 348 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 GADD45GO95257 159 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 ITGAMP11215 1152 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 KCNJ5P48544 419 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 RGS19P49795 217 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 CRISP3P54108 245 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 TRMT12Q53H54 448 aaKnown RBP17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 ZC3H12BQ5HYM0 836 aaKnown RBP17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 CA13Q8N1Q1 262 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 ZBTB8BQ8NAP8 495 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 APOBEC4Q8WW27 367 aaKnown RBP17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 UBE2FQ969M7 185 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 NMD3Q96D46 503 aaKnown RBP17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 NIPSNAP1Q9BPW8 284 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 PCED1AQ9H1Q7 454 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 MS4A12Q9NXJ0 267 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 GMPPBQ9Y5P6 360 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 GPC6Q9Y625 555 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 SERPINB7O75635 380 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 MED26O95402 600 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 CPMP14384 443 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 KCNC4Q03721 635 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 PIGFQ07326 219 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 C6orf141Q5SZD1 244 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 LAIR2Q6ISS4 152 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 KLHL35Q6PF15 583 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 PHF10Q8WUB8 498 aaKnown RBP17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 SLC9A6Q92581 669 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 MOAP1Q96BY2 351 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 ZG16BQ96DA0 208 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 GIMAP5Q96F15 307 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 ZNF354BQ96LW1 612 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 LYRM4Q9HD34 91 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 FRYLO94915 3013 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 A0A0A6YYC8 382 aaPredicted RBP17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 A0A1B0GVT2 93 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 LMO7DNF2Z398 122 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 I3L1I5 382 aaPredicted RBP17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 CYR61O00622 381 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 BCAT2O15382 392 aaPredicted RBP17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 UGT2B11O75310 529 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 PORP16435 677 aaPredicted RBP17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 RHCEP18577 417 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 TUBA4AP68366 448 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 BNIP3Q12983 259 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 CBX3Q13185 183 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 MICAQ29983 383 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 KRT73Q86Y46 540 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 SLC16A11Q8NCK7 471 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 PAIP2BQ9ULR5 123 aaKnown RBP17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 SPACA6W5XKT8 324 aa17.18■□□□□ 0.34
SDR39U1-220ENST00000556548 NINQ8N4C6 2090 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 BMP10O95393 424 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 ANXA11P50995 505 aaKnown RBP17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 CHRNEQ04844 493 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 NPRL3Q12980 569 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 SLC36A4Q6YBV0 504 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 ZNF605Q86T29 641 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 METTL27Q8N6F8 245 aaPredicted RBP17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 BPIFB6Q8NFQ5 453 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 GTPBP3Q969Y2 492 aaKnown RBP17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 SLC35A4Q96G79 324 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 ANKHQ9HCJ1 492 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 CTPS2Q9NRF8 586 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 SOHLH2Q9NX45 425 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 HCN3Q9P1Z3 774 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 SPTBP11277 2137 aa17.17■□□□□ 0.34
SDR39U1-220ENST00000556548 hCG_2014768A0A024R1R8 64 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 TRIM64A6NGJ6 449 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 CASC3O15234 703 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 TPST2O60704 377 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 CDC123O75794 336 aaPredicted RBP17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 PIAS2O75928 621 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 PDGFBP01127 241 aaPredicted RBP17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 CDH2P19022 906 aaPredicted RBP17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 NT5EP21589 574 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 CRHBPP24387 322 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 SOX18P35713 384 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 ALDH3B2P48448 385 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 MAN2A2P49641 1150 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 RPP38P78345 283 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 HPCAP84074 193 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 FGD3Q5JSP0 725 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 MANEAQ5SRI9 462 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 TCTN3Q6NUS6 607 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 USP53Q70EK8 1073 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 TAGAPQ8N103 731 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 ADAMTS15Q8TE58 950 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms