RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 GPR137Q96N19 417 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 C19orf43Q9BQ61 176 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 ADGRL4Q9HBW9 690 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 CYP39A1Q9NYL5 469 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 B4GALT7Q9UBV7 327 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 Q9UF83 564 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 FETUBQ9UGM5 382 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 MOSPD1Q9UJG1 213 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 APPL1Q9UKG1 709 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 SEC22BO75396 215 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 BCAS2O75934 225 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-221ENST00000556534 RPS4XP62701 263 aaKnown RBP3.34□□□□□ -1.87
SCFD1-221ENST00000556534 PDE7AQ13946 482 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 TRADDQ15628 312 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 PPP1R3AQ16821 1122 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 CNPY1Q3B7I2 92 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 DNAJC21Q5F1R6 531 aaKnown RBP3.34□□□□□ -1.87
SCFD1-221ENST00000556534 NKAIN2Q5VXU1 208 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 ADAMTSL5Q6ZMM2 481 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 ZNF410Q86VK4 478 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 ST7LQ8TDW4 575 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 P3H4Q92791 437 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 CNOT6LQ96LI5 555 aaKnown RBP3.34□□□□□ -1.87
SCFD1-221ENST00000556534 TNMDQ9H2S6 317 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 TMEM245Q9H330 911 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 KCNMB3Q9NPA1 279 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.34□□□□□ -1.87
SCFD1-221ENST00000556534 PIGVQ9NUD9 493 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 TUBGCP4Q9UGJ1 667 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 IKZF3Q9UKT9 509 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 ODF2LQ9ULJ1 636 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 MRPS2Q9Y399 296 aaKnown RBP3.34□□□□□ -1.87
SCFD1-221ENST00000556534 TEX264Q9Y6I9 313 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 AFF2P51816 1311 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 KIF7Q2M1P5 1343 aa3.34□□□□□ -1.87
SCFD1-221ENST00000556534 GOT2P00505 430 aaKnown RBP3.33□□□□□ -1.88
SCFD1-221ENST00000556534 FERP16591 822 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 GAP43P17677 238 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 MAT2AP31153 395 aaKnown RBP3.33□□□□□ -1.88
SCFD1-221ENST00000556534 ARHGDIAP52565 204 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 SMC1AQ14683 1233 aaKnown RBP3.33□□□□□ -1.88
SCFD1-221ENST00000556534 TGIF1Q15583 401 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 GPAT3Q53EU6 434 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 MARC1Q5VT66 337 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 ASRGL1Q7L266 308 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 SLCO4A1Q96BD0 722 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 PIWIL1Q96J94 861 aaKnown RBP3.33□□□□□ -1.88
SCFD1-221ENST00000556534 SIGLEC12Q96PQ1 595 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 ACCSQ96QU6 501 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 FAM213AQ9BRX8 229 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 GPR174Q9BXC1 333 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 DCTPP1Q9H773 170 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 EMCNQ9ULC0 261 aa3.33□□□□□ -1.88
SCFD1-221ENST00000556534 SPAG9O60271 1321 aaKnown RBP3.33□□□□□ -1.88
SCFD1-221ENST00000556534 ZNF646O15015 1829 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-221ENST00000556534 CYB561D2O14569 222 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 SLC4A1P02730 911 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 SNRPCP09234 159 aaKnown RBP3.32□□□□□ -1.88
SCFD1-221ENST00000556534 ACADSBP45954 432 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 NT5C2P49902 561 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 CXCL6P80162 114 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 ZNF85Q03923 595 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 HKDC1Q2TB90 917 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 FHL5Q5TD97 284 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 TAF3Q5VWG9 929 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 APOOLQ6UXV4 268 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 GCNT7Q6ZNI0 430 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 LUZP1Q86V48 1076 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 VN1R17PQ8TDU5 208 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 CPXM1Q96SM3 734 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 SPXQ9BT56 116 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 DEFB126Q9BYW3 111 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 RNF41Q9H4P4 317 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-221ENST00000556534 NRN1Q9NPD7 142 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 PRMT8Q9NR22 394 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-221ENST00000556534 ANO10Q9NW15 660 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 SENP1Q9P0U3 644 aa3.32□□□□□ -1.88
SCFD1-221ENST00000556534 DHX29Q7Z478 1369 aaKnown RBP3.32□□□□□ -1.88
SCFD1-221ENST00000556534 NPC1L1Q9UHC9 1359 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 IGHV3-35A0A0C4DH35 117 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 TRABD2BA6NFA1 517 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 K7ERI5 159 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 EEF2KO00418 725 aaKnown RBP3.31□□□□□ -1.88
SCFD1-221ENST00000556534 CHEK1O14757 476 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 LRP3O75074 770 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 B3GALNT1O75752 331 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 CXCL14O95715 111 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 AREGP15514 252 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 MDH2P40926 338 aaKnown RBP3.31□□□□□ -1.88
SCFD1-221ENST00000556534 NSFP46459 744 aaKnown RBP3.31□□□□□ -1.88
SCFD1-221ENST00000556534 PITPNBP48739 271 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 MEOX2P50222 304 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 ZNF131P52739 623 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 CASP9P55211 416 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 IGLV3-21P80748 117 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-221ENST00000556534 ARF5P84085 180 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 NDPQ00604 133 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 PAX2Q02962 417 aa3.31□□□□□ -1.88
SCFD1-221ENST00000556534 ZNF33BQ06732 778 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms