RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 RPS6KA3P51812 740 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 LBX1P52954 281 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 PRRX1P54821 245 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 TAS2R50P59544 299 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 DNAJB13P59910 316 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 SNRPD1P62314 119 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 TUBA4AP68366 448 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 E2F1Q01094 437 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 SPIBQ01892 262 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 RBPJQ06330 500 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 BCL2L1Q07817 233 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ABRQ12979 859 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 PRKAA1Q13131 559 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 CCNIQ14094 377 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 CYTH1Q15438 398 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 FSCBQ5H9T9 825 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ARMC12Q5T9G4 340 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 METTL21CQ5VZV1 264 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ZDHHC20Q5W0Z9 365 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 RAET1GQ6H3X3 334 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 KIRREL2Q6UWL6 708 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 C16orf89Q6UX73 402 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 B3GNT6Q6ZMB0 384 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 PIWIL4Q7Z3Z4 852 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 GLT6D1Q7Z4J2 308 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 PTAR1Q7Z6K3 402 aaPredicted RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 CMC1Q7Z7K0 106 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 TMC8Q8IU68 726 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ARID3BQ8IVW6 561 aaPredicted RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 CMTM8Q8IZV2 173 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 MAB21L3Q8N8X9 362 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 SLC24A4Q8NFF2 622 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 OR13J1Q8NGT2 312 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 MAFAQ8NHW3 353 aaPredicted RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 C9orf43Q8TAL5 461 aaPredicted RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 MIPOL1Q8TD10 442 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ROBO4Q8WZ75 1007 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 BADQ92934 168 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 RSPRY1Q96DX4 576 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 NRBF2Q96F24 287 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 TRMT61AQ96FX7 289 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 ATXN7L3BQ96GX2 97 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ZNF419Q96HQ0 510 aaPredicted RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 CDKN2AIPNLQ96HQ2 116 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 NSL1Q96IY1 281 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ZNF778Q96MU6 729 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 RILPQ96NA2 401 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 TRIB3Q96RU7 358 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 PRR25Q96S07 402 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 FEM1AQ9BSK4 669 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 TRMOQ9BU70 441 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ABHD6Q9BV23 337 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 C1QTNF1Q9BXJ1 281 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 TDRD1Q9BXT4 1180 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 SEMA4CQ9C0C4 833 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ILKAPQ9H0C8 392 aaPredicted RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 ATP13A3Q9H7F0 1226 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 EML4Q9HC35 981 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 ZNF334Q9HCZ1 680 aaPredicted RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 SLC6A13Q9NSD5 602 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.85□□□□□ -1.63
SRP54-211ENST00000556445 TAS2R13Q9NYV9 303 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 PLK2Q9NYY3 685 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 TMEM216Q9P0N5 145 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 KIAA1456Q9P272 454 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 HEY2Q9UBP5 337 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 IL17BQ9UHF5 180 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 LNPEPQ9UIQ6 1025 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 SLC25A13Q9UJS0 675 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 EMCNQ9ULC0 261 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 RUVBL2Q9Y230 463 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 RAP2CQ9Y3L5 183 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 RAI2Q9Y5P3 530 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 COPG1Q9Y678 874 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 HELZP42694 1942 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 PTPRSQ13332 1948 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 TRPC5OSA6NMA1 111 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SYCE1LA8MT33 242 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 C17orf100A8MU93 164 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 G3V2L1 256 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 GOLGA8TH3BQL2 631 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 H7C1Q1 480 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SLC22A2O15244 555 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SMIM24O75264 130 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 NME6O75414 186 aaPredicted RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 VPS26AO75436 327 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SLC25A12O75746 678 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SRP72O76094 671 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 POP4O95707 220 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 GSRP00390 522 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 GOT2P00505 430 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 NPPAP01160 153 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 RLN1P04808 185 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ENO1P06733 434 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 SERPINA6P08185 405 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 LINC00271P0C7V0 271 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SLC35E2BP0CK96 405 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 NQO1P15559 274 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 FUT1P19526 365 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 CYP2A7P20853 494 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms