RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 C17orf47Q8NEP4 570 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 GNRHR2Q96P88 292 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 C1QTNF3Q9BXJ4 246 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 NXF5Q9H1B4 397 aaKnown RBP20.7■□□□□ 0.9
ACTN1-220ENST00000556433 BRF2Q9HAW0 419 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 PSME2Q9UL46 239 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 SPG11Q96JI7 2443 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 NCKAP5O14513 1909 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 HSPB2A8KAH6 182 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 OR4F21O95013 312 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 CTAGE8P0CG41 777 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 ABCD3P28288 659 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 HSD17B3P37058 310 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 CDK9P50750 372 aaKnown RBP20.69■□□□□ 0.9
ACTN1-220ENST00000556433 MGAT2Q10469 447 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 HSPB2Q16082 182 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 FNDC7Q5VTL7 733 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 FAM219BQ5XKK7 198 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 SEM1Q6ZVN7 128 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 CTAGE4Q8IX94 777 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 TIMP4Q99727 224 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 MAT2BQ9NZL9 334 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 TRPS1Q9UHF7 1281 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 ZNF225Q9UK10 706 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 CFL2Q9Y281 166 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 DTX4Q9Y2E6 619 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 AKAP9Q99996 3911 aa20.69■□□□□ 0.9
ACTN1-220ENST00000556433 FREM3P0C091 2139 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 EXOC1LA0A1B0GW35 172 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 ZWINTO95229 277 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 EPPINO95925 133 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 ATP1B1P05026 303 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 HPNP05981 417 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 ABCB1P08183 1280 aaPredicted RBP20.68■□□□□ 0.9
ACTN1-220ENST00000556433 NAGAP17050 411 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 TAC1P20366 129 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 ALDH9A1P49189 494 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 CLCQ05315 142 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 CRYZQ08257 329 aaKnown RBP20.68■□□□□ 0.9
ACTN1-220ENST00000556433 EXOSC7Q15024 291 aaKnown RBP20.68■□□□□ 0.9
ACTN1-220ENST00000556433 TOMM20Q15388 145 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 NNATQ16517 81 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 ARSKQ6UWY0 536 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 C1orf52Q8N6N3 182 aaKnown RBP20.68■□□□□ 0.9
ACTN1-220ENST00000556433 ADCY4Q8NFM4 1077 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 KLHL29Q96CT2 875 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 HBEGFQ99075 208 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 FAIM2Q9BWQ8 316 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 UBQLN3Q9H347 655 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 VPS29Q9UBQ0 182 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 C15orf41Q9Y2V0 281 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 SLC6A5Q9Y345 797 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 L3MBTL1Q9Y468 752 aa20.68■□□□□ 0.9
ACTN1-220ENST00000556433 GNB5O14775 395 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 PPM1BO75688 479 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 SUPT7LO94864 414 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 TRA2BP62995 288 aaKnown RBP20.67■□□□□ 0.9
ACTN1-220ENST00000556433 ACSF3Q4G176 576 aaPredicted RBP20.67■□□□□ 0.9
ACTN1-220ENST00000556433 UNC50Q53HI1 259 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 NUP54Q7Z3B4 507 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 CDYL2Q8N8U2 506 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 TMEM41AQ96HV5 264 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 ITPAQ9BY32 194 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 METTL7AQ9H8H3 244 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 TMEM216Q9P0N5 145 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 ZNF639Q9UID6 485 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 ZNF780BQ9Y6R6 833 aa20.67■□□□□ 0.9
ACTN1-220ENST00000556433 ANKRD17O75179 2603 aaKnown RBP20.66■□□□□ 0.9
ACTN1-220ENST00000556433 MANBAO00462 879 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 CDH16O75309 829 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 ESRRBO95718 433 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 KRT6AP02538 564 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 KRT6BP04259 564 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 KRT6CP48668 564 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 WNT3P56703 355 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 DUSP2Q05923 314 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 SNTB1Q13884 538 aaKnown RBP20.66■□□□□ 0.9
ACTN1-220ENST00000556433 TRMT12Q53H54 448 aaKnown RBP20.66■□□□□ 0.9
ACTN1-220ENST00000556433 EIPR1Q53HC9 387 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 TCHHL1Q5QJ38 904 aaPredicted RBP20.66■□□□□ 0.9
ACTN1-220ENST00000556433 TIGD3Q6B0B8 471 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 VASNQ6EMK4 673 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 DESI1Q6ICB0 168 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 FAM180BQ6P0A1 224 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 TIFABQ6ZNK6 161 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 PM20D2Q8IYS1 436 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 SIMC1Q8NDZ2 872 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 TNIP2Q8NFZ5 429 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 OR52R1Q8NGF1 315 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 HSPBAP1Q96EW2 488 aa20.66■□□□□ 0.9
ACTN1-220ENST00000556433 LCORQ96JN0 433 aaPredicted RBP20.66■□□□□ 0.9
ACTN1-220ENST00000556433 KDM4EB2RXH2 506 aaPredicted RBP20.65■□□□□ 0.9
ACTN1-220ENST00000556433 SYT5O00445 386 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 CBX7O95931 251 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 BMP5P22003 454 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 CEACAM8P31997 349 aaPredicted RBP20.65■□□□□ 0.9
ACTN1-220ENST00000556433 SOX18P35713 384 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 RASA2Q15283 850 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 SF3B4Q15427 424 aaKnown RBP eCLIP20.65■□□□□ 0.91e-25■■■■■ 49.5
ACTN1-220ENST00000556433 LTB4RQ15722 352 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms