RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 LRGUKQ96M69 825 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 SPSB2Q99619 263 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 CPPED1Q9BRF8 314 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 SLC39A3Q9BRY0 314 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 ALG2Q9H553 416 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 KAT8Q9H7Z6 458 aaKnown RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 TRIM45Q9H8W5 580 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 SIRT3Q9NTG7 399 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 RYDENQ9NUL5 291 aaKnown RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 CMTM6Q9NX76 183 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 MAT2BQ9NZL9 334 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 CALML5Q9NZT1 146 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 MRTO4Q9UKD2 239 aaKnown RBP8.61□□□□□ -1.03
ACTN1-218ENST00000556343 ACSL6Q9UKU0 697 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 LIPT1Q9Y234 373 aa8.61□□□□□ -1.03
ACTN1-218ENST00000556343 TEX51A0A1B0GUA7 166 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 A0A1W2PNU3 283 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 ELOVL7A1L3X0 281 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 FAM220BPB1ANY3 271 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 ASNA1O43681 348 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 AK1P00568 194 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 IFNA14P01570 189 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 ALOX5P09917 674 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 LIPCP11150 499 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 HOXB9P17482 250 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 MMP11P24347 488 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 DSTNP60981 165 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 MRPS35P82673 323 aaKnown RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 HPCAP84074 193 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 DUSP2Q05923 314 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 FUT7Q11130 342 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF155Q12901 538 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 GAB1Q13480 694 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 TRIM25Q14258 630 aaKnown RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 LTB4RQ15722 352 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 EXT1Q16394 746 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 GTDC1Q4AE62 458 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 TRMT12Q53H54 448 aaKnown RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 PIGGQ5H8A4 983 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 RABL3Q5HYI8 236 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 C1orf146Q5VVC0 180 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 LCN10Q6JVE6 187 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 CDC73Q6P1J9 531 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 PGM2L1Q6PCE3 622 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 FAM111BQ6SJ93 734 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 SLC29A4Q7RTT9 530 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 TIPARPQ7Z3E1 657 aaKnown RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 NET1Q7Z628 596 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 IFNEQ86WN2 208 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 MSRB3Q8IXL7 192 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 C11orf65Q8NCR3 313 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 OR7G2Q8NG99 324 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 OR52R1Q8NGF1 315 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 OR5L2Q8NGL0 311 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 PNPT1Q8TCS8 783 aaKnown RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 MIPOL1Q8TD10 442 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 PTPMT1Q8WUK0 201 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 XAGE5Q8WWM1 108 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 AURKBQ96GD4 344 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 SENP5Q96HI0 755 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 STACQ99469 402 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 OR8D2Q9GZM6 311 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 OR10A5Q9H207 317 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 EPS8L2Q9H6S3 715 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 GPN2Q9H9Y4 310 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 GIN1Q9NXP7 522 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 P2RX2Q9UBL9 471 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 SUCOQ9UBS9 1254 aaKnown RBP8.6□□□□□ -1.03
ACTN1-218ENST00000556343 CD300AQ9UGN4 299 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF639Q9UID6 485 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 MAGEL2Q9UJ55 1249 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 TCFL5Q9UL49 500 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 ERVK-19Q9WJR5 959 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 ANGPT4Q9Y264 503 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF451Q9Y4E5 1061 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 PCDHGA6Q9Y5G7 932 aa8.6□□□□□ -1.03
ACTN1-218ENST00000556343 LOC102723996A0A087X1L8 192 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 A0A1W2PS29 197 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 PMS2P1A4D2B8 440 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 PRORSD1PA6NEY8 169 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 TRABD2BA6NFA1 517 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 OR2W5A6NFC9 320 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 SAGE2PA6NJ88 616 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 NME4O00746 187 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 KLF7O75840 302 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-218ENST00000556343 PDE9AO76083 593 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 HMGN2P05204 90 aaKnown RBP8.59□□□□□ -1.03
ACTN1-218ENST00000556343 NR2F1P10589 423 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 TCN1P20061 433 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-218ENST00000556343 PLA2G5P39877 138 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 GSK3BP49841 420 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 CLCN2P51788 898 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 KCNJ2P63252 427 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 MGAT2Q10469 447 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 VEZF1Q14119 521 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 LASP1Q14847 261 aaKnown RBP8.59□□□□□ -1.03
ACTN1-218ENST00000556343 MTX3Q5HYI7 312 aa8.59□□□□□ -1.03
ACTN1-218ENST00000556343 TNFAIP8L2Q6P589 184 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-218ENST00000556343 PAPD4Q6PIY7 484 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms