RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 USP53Q70EK8 1073 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 CEP68Q76N32 757 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 GALNT10Q86SR1 603 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 TRIM73Q86UV7 250 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 GKN2Q86XP6 184 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 C8orf59Q8N0T1 100 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-235ENST00000556082 OR4C15Q8NGM1 316 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 OR10Q1Q8NGQ4 319 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 OR10G6Q8NH81 332 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 APOBEC4Q8WW27 367 aaKnown RBP7.8□□□□□ -1.16
ATXN3-235ENST00000556082 PATE1Q8WXA2 126 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 KLHL6Q8WZ60 621 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 DNASE2BQ8WZ79 361 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 HDAC2Q92769 488 aaKnown RBP7.8□□□□□ -1.16
ATXN3-235ENST00000556082 ELP4Q96EB1 424 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 FBXL20Q96IG2 436 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 MUS81Q96NY9 551 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF607Q96SK3 696 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 MYCBPQ99417 103 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-235ENST00000556082 PIP5K1AQ99755 562 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 MAPKAP1Q9BPZ7 522 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 SPATA5L1Q9BVQ7 753 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 FOXQ1Q9C009 403 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 RAB33BQ9H082 229 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 SERHL2Q9H4I8 314 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 C3orf14Q9HBI5 128 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 C5AR2Q9P296 337 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 P2RX2Q9UBL9 471 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 FOXD3Q9UJU5 478 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-235ENST00000556082 FBXL21Q9UKT6 434 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 FBXW2Q9UKT8 454 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 DAPP1Q9UN19 280 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 LIPT1Q9Y234 373 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 SNX11Q9Y5W9 270 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 SLCO1B1Q9Y6L6 691 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF780BQ9Y6R6 833 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 ENPP4Q9Y6X5 453 aa7.8□□□□□ -1.16
ATXN3-235ENST00000556082 HEATR5BQ9P2D3 2071 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 LOC105369274A0A096LPK9 316 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 CCDC163A0A0D9SF12 145 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 LOC102723532A0A0G2JNH3 316 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 A0A0G2JPF8 293 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 A0A0J9YVX5 310 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 PRAMEF25A6NGN4 478 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 WASHC1A8K0Z3 465 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 HNRNPCL2B2RXH8 293 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 HNRNPCL3B7ZW38 293 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 LMO7DNF2Z398 122 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 P2RX6O15547 441 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 HS6ST1O60243 411 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 PRAMEF10O60809 474 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 AGR2O95994 175 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 HNRNPCL4P0DMR1 293 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ANXA8P13928 327 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 FOSL1P15407 271 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 FOSL2P15408 326 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 MATN1P21941 496 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 PRKACGP22612 351 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 CPN2P22792 545 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 IGFBP5P24593 272 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 PPP2R1BP30154 601 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 LIMS1P48059 325 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 CXCL12P48061 93 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 KCNJ5P48544 419 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 MAN2A2P49641 1150 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 HLCSP50747 726 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 DAPP51397 102 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 LIM2P55344 173 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 CXCR4P61073 352 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ISL1P61371 349 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 HNRNPKP61978 463 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ZP2Q05996 745 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 C1orf61Q13536 156 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ZIK1Q3SY52 487 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF691Q5VV52 312 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 AP1ARQ63HQ0 302 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 TNFAIP8L2Q6P589 184 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF605Q86T29 641 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 TSPYL5Q86VY4 417 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-235ENST00000556082 KRT73Q86Y46 540 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 HS3ST5Q8IZT8 346 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 OR4N4Q8N0Y3 316 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 LGI4Q8N135 537 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 CARFQ8N187 725 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF786Q8N393 782 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ARL14Q8N4G2 192 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ARHGEF39Q8N4T4 335 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 CSNK1A1LQ8N752 337 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 SETD9Q8NE22 299 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 OR4K14Q8NGD5 310 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 BBS10Q8TAM1 723 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 SPPL2AQ8TCT8 520 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 GIPC3Q8TF64 312 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 NCSTNQ92542 709 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 TANKQ92844 425 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 TCTN2Q96GX1 697 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 TMEM19Q96HH6 336 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 SLC35G5Q96KT7 338 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 ZNF285Q96NJ3 590 aa7.79□□□□□ -1.16
ATXN3-235ENST00000556082 FCRL4Q96PJ5 515 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms