RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 C20orf27Q9GZN8 174 aa12.6□□□□□ -0.39
SNX6-203ENST00000555416 PFDN4Q9NQP4 134 aa12.6□□□□□ -0.39
SNX6-203ENST00000555416 SLC35C2Q9NQQ7 365 aa12.6□□□□□ -0.39
SNX6-203ENST00000555416 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNX6-203ENST00000555416 C1orf109Q9NX04 203 aa12.6□□□□□ -0.39
SNX6-203ENST00000555416 SH3BGRL2Q9UJC5 107 aa12.6□□□□□ -0.39
SNX6-203ENST00000555416 PSME2Q9UL46 239 aa12.6□□□□□ -0.39
SNX6-203ENST00000555416 CHCHD2Q9Y6H1 151 aaPredicted RBP12.6□□□□□ -0.39
SNX6-203ENST00000555416 ZNF780BQ9Y6R6 833 aa12.6□□□□□ -0.39
SNX6-203ENST00000555416 A1L4Q6 167 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 FAM166BA8MTA8 275 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 SLC19A2O60779 497 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 PDE9AO76083 593 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 CLDN1O95832 211 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 JUNP05412 331 aaKnown RBP12.59□□□□□ -0.39
SNX6-203ENST00000555416 SDC1P18827 310 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 CNR1P21554 472 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 EMDP50402 254 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 FBXW4P57775 412 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 HEPACAMQ14CZ8 416 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 C3AR1Q16581 482 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 ZNF385BQ569K4 471 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 PRAMEF20Q5VT98 475 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 BICRALQ6AI39 1079 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 ANKRD26P1Q6NSI1 321 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 LRIG3Q6UXM1 1119 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 NUDCD3Q8IVD9 361 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 DDIASQ8IXT1 998 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 CLYBLQ8N0X4 340 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 SLC15A4Q8N697 577 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 FAM13CQ8NE31 585 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 OR7G2Q8NG99 324 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 OR7G1Q8NGA0 311 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 CLHC1Q8NHS4 586 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 FAM76AQ8TAV0 307 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 ZNF675Q8TD23 568 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 PAQR8Q8TEZ7 354 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 NUDT8Q8WV74 236 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 PGM2Q96G03 612 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 SGCZQ96LD1 299 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 DEFB127Q9H1M4 99 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 SSU72Q9NP77 194 aaKnown RBP12.59□□□□□ -0.39
SNX6-203ENST00000555416 TUBA8Q9NY65 449 aaPredicted RBP12.59□□□□□ -0.39
SNX6-203ENST00000555416 EHD3Q9NZN3 535 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 BCAP29Q9UHQ4 241 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 BAIAP2L1Q9UHR4 511 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 TINAGQ9UJW2 476 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 CNOT11Q9UKZ1 510 aaKnown RBP12.59□□□□□ -0.39
SNX6-203ENST00000555416 ZNF835Q9Y2P0 537 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 MYO7BQ6PIF6 2116 aa12.59□□□□□ -0.39
SNX6-203ENST00000555416 ATP6AP2A0A1C7CYW4 349 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 MYO1GB0I1T2 1018 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 TFECO14948 347 aaPredicted RBP12.58□□□□□ -0.4
SNX6-203ENST00000555416 RGS14O43566 566 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 AKAP10O43572 662 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 ZG16O60844 167 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 ATP6AP2O75787 350 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 GLSO94925 669 aaPredicted RBP12.58□□□□□ -0.4
SNX6-203ENST00000555416 CELA3AP09093 270 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 PPIAP62937 165 aaKnown RBP12.58□□□□□ -0.4
SNX6-203ENST00000555416 RPL38P63173 70 aaKnown RBP12.58□□□□□ -0.4
SNX6-203ENST00000555416 CHI3L2Q15782 390 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 NTRK2Q16620 822 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 GALNTL6Q49A17 601 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 KRTCAP3Q53RY4 240 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 XKR7Q5GH72 579 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 FAM47EQ6ZV65 393 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 NCCRP1Q6ZVX7 275 aaPredicted RBP12.58□□□□□ -0.4
SNX6-203ENST00000555416 POGLUT1Q8NBL1 392 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 RELTQ969Z4 430 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 TP53INP1Q96A56 240 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 TSSK3Q96PN8 268 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 PHF12Q96QT6 1004 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 FAM173AQ9BQD7 235 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 TTTY12Q9BZ98 90 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 KCNK9Q9NPC2 374 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 SACM1LQ9NTJ5 587 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 TAS2R7Q9NYW3 318 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 HRH3Q9Y5N1 445 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 NPFFR2Q9Y5X5 522 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 LIPGQ9Y5X9 500 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 ZNF407Q9C0G0 2248 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 NCKAP5O14513 1909 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 EXPH5Q8NEV8 1989 aa12.58□□□□□ -0.4
SNX6-203ENST00000555416 TRGV8A0A0C4DH27 118 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 A0A1B0GTH9 108 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 LRRC3CA6NJW4 275 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 PEX11AO75192 247 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 SKAP2O75563 359 aaPredicted RBP12.57□□□□□ -0.4
SNX6-203ENST00000555416 P04436 131 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 SERPINE1P05121 402 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 RFPL3SP0C7P2 107 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 NEFHP12036 1026 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 BCKDHAP12694 445 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 BGNP21810 368 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 ABCD3P28288 659 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 CA7P43166 264 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 GSTM5P46439 218 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 WDR4P57081 412 aaKnown RBP12.57□□□□□ -0.4
SNX6-203ENST00000555416 CORO7P57737 925 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms