RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PDCD2Q16342 344 aaPredicted RBP11.18□□□□□ -0.62
SRP54-206ENST00000555317 UGT3A2Q3SY77 523 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 KRTCAP3Q53RY4 240 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 SLC22A10Q63ZE4 541 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 ATG16L1Q676U5 607 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 FAM111BQ6SJ93 734 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 Q6ZSR9 355 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 FAM47EQ6ZV65 393 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 R3HCC1LQ7Z5L2 792 aaKnown RBP11.18□□□□□ -0.62
SRP54-206ENST00000555317 ZNF227Q86WZ6 799 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 ZNF615Q8N8J6 731 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 FNDC5Q8NAU1 212 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 OR52R1Q8NGF1 315 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 OR5M3Q8NGP4 307 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 OR6Y1Q8NGX8 325 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 CLHC1Q8NHS4 586 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 ZFP28Q8NHY6 868 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 KAT2AQ92830 837 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 TP53INP1Q96A56 240 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 PPCDCQ96CD2 204 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 MAGED4Q96JG8 741 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 ZNF681Q96N22 645 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 TSSK3Q96PN8 268 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 TSPAN10Q9H1Z9 355 aaPredicted RBP11.18□□□□□ -0.62
SRP54-206ENST00000555317 NPIPA1Q9UND3 350 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 OSGIN2Q9Y236 505 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 EIF3LQ9Y262 564 aaKnown RBP11.18□□□□□ -0.62
SRP54-206ENST00000555317 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.18□□□□□ -0.62
SRP54-206ENST00000555317 RAP2CQ9Y3L5 183 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 EML6Q6ZMW3 1958 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 SETXQ7Z333 2677 aaKnown RBP11.17□□□□□ -0.62
SRP54-206ENST00000555317 NINQ8N4C6 2090 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 ATP6AP2A0A1C7CYW4 349 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 G3V3Y1 287 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 ITM2AO43736 263 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 COQ9O75208 318 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 ATP6AP2O75787 350 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 ZIC2O95409 532 aaPredicted RBP11.17□□□□□ -0.62
SRP54-206ENST00000555317 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
SRP54-206ENST00000555317 FBXO45P0C2W1 286 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 BCKDHAP12694 445 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 SDC1P18827 310 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 GPX3P22352 226 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 TACR1P25103 407 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 MST1P26927 711 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 ARRB2P32121 409 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 GPC1P35052 558 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 RPL3P39023 403 aaKnown RBP11.17□□□□□ -0.62
SRP54-206ENST00000555317 RFC3P40938 356 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 TDGF1P3P51864 188 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 SLC18A1P54219 525 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 KCNK10P57789 538 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 DCAF7P61962 342 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 KCNJ2P63252 427 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 DUSP2Q05923 314 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 ZNF155Q12901 538 aaPredicted RBP11.17□□□□□ -0.62
SRP54-206ENST00000555317 UBAP2LQ14157 1087 aaKnown RBP11.17□□□□□ -0.62
SRP54-206ENST00000555317 KIAA0040Q15053 153 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 RPS6KA2Q15349 733 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 NNATQ16517 81 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 RFTN2Q52LD8 501 aaPredicted RBP11.17□□□□□ -0.62
SRP54-206ENST00000555317 TRMT12Q53H54 448 aaKnown RBP11.17□□□□□ -0.62
SRP54-206ENST00000555317 ZNF628Q5EBL2 1059 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 XKR7Q5GH72 579 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 AGBL2Q5U5Z8 902 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 ZNF324BQ6AW86 544 aaPredicted RBP11.17□□□□□ -0.62
SRP54-206ENST00000555317 LIX1Q8N485 282 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 ZNF781Q8N8C0 355 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 C17orf47Q8NEP4 570 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 TLCD1Q96CP7 247 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 PPP1R36Q96LQ0 422 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 FAM173AQ9BQD7 235 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 C1orf50Q9BV19 199 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 ITPAQ9BY32 194 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 REEP4Q9H6H4 257 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 TAS2R9Q9NYW1 312 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 TAS2R7Q9NYW3 318 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 SH3BP4Q9P0V3 963 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 DNAJC13O75165 2243 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 GTF3C1Q12789 2109 aa11.17□□□□□ -0.62
SRP54-206ENST00000555317 DOPEY1Q5JWR5 2465 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 MYO1GB0I1T2 1018 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 ACOX3O15254 700 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 NADKO95544 446 aaPredicted RBP11.16□□□□□ -0.62
SRP54-206ENST00000555317 CBX7O95931 251 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 CCL3P10147 92 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 PRPS2P11908 318 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 S1PR1P21453 382 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 CNR1P21554 472 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 KRT20P35900 424 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 PER3P56645 1201 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 PSPHP78330 225 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 PLCXD2Q0VAA5 305 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 MGAT2Q10469 447 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 BST1Q10588 318 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 CEBPEQ15744 281 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.16□□□□□ -0.622e-6■■□□□ 13.9
SRP54-206ENST00000555317 ZNF791Q3KP31 576 aaPredicted RBP11.16□□□□□ -0.62
SRP54-206ENST00000555317 ANKRD26P1Q6NSI1 321 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 MYO7BQ6PIF6 2116 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms