RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 OR4A15Q8NGL6 344 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 BCAS4Q8TDM0 211 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 PSMF1Q92530 271 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 EXTL1Q92935 676 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 VPS33AQ96AX1 596 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 CRELD1Q96HD1 420 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 ITCHQ96J02 903 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 ZNF354BQ96LW1 612 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 AGAP4Q96P64 663 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 PANX1Q96RD7 426 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 RYDENQ9NUL5 291 aaKnown RBP13.27□□□□□ -0.29
CHD8-208ENST00000555301 GPR83Q9NYM4 423 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 NTMQ9P121 344 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 SNX8Q9Y5X2 465 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 CAPN7Q9Y6W3 813 aa13.27□□□□□ -0.29
CHD8-208ENST00000555301 MKRN2OSH3BPM6 223 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 RFXANKO14593 260 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 SNRPB2P08579 225 aaKnown RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 CCT3P49368 545 aaKnown RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 POLE2P56282 527 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 EXOSC7Q15024 291 aaKnown RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 EBPQ15125 230 aaKnown RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 MEP1AQ16819 746 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 VPS26BQ4G0F5 336 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 HLA-DQA1Q5Y7H0 255 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 GK5Q6ZS86 529 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 RPS19BP1Q86WX3 136 aaKnown RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 C9orf40Q8IXQ3 194 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 ARMC10Q8N2F6 343 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 SIRT6Q8N6T7 355 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 AMER2Q8N7J2 671 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 CCDC197Q8NCU1 140 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 NUP43Q8NFH3 380 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 FDCSPQ8NFU4 85 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 OR56A1Q8NGH5 318 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 GOT1L1Q8NHS2 421 aaPredicted RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 C16orf52Q8NHV5 167 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 SFXN5Q8TD22 340 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 PCSK5Q92824 1860 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 FAM120BQ96EK7 910 aaKnown RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 MAGED4Q96JG8 741 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 MS4A4EQ96PG1 132 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 ARHGAP9Q9BRR9 750 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 SLC25A23Q9BV35 468 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 CXorf36Q9H7Y0 433 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 ANKRA2Q9H9E1 313 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 SLC52A3Q9NQ40 469 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 SIRT3Q9NTG7 399 aaPredicted RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 ZCCHC3Q9NUD5 404 aaKnown RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 ARMCX1Q9P291 453 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 ABI3Q9P2A4 366 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 LEF1Q9UJU2 399 aaPredicted RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 NDUFAF1Q9Y375 327 aa13.26□□□□□ -0.29
CHD8-208ENST00000555301 PCDHGA9Q9Y5G4 932 aaKnown RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 HEMK1Q9Y5R4 338 aaPredicted RBP13.26□□□□□ -0.29
CHD8-208ENST00000555301 C2orf92A0A1B0GVN3 265 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 TTC36A6NLP5 189 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 CDK2AP1O14519 115 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 ANGPT2O15123 496 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 PSMG1O95456 288 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 ANP32DO95626 131 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 CAPN3P20807 821 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 UQCRC2P22695 453 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 SOAT1P35610 550 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 SOX11P35716 441 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 TRPC1P48995 793 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 EMDP50402 254 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 PRKAG1P54619 331 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 DCAF7P61962 342 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 DUSP8Q13202 625 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 C6orf10Q5SRN2 563 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 ABHD17BQ5VST6 288 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 ZCCHC12Q6PEW1 402 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 ISLR2Q6UXK2 745 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 SZRD1Q7Z422 152 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 SIMC1Q8NDZ2 872 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 C17orf47Q8NEP4 570 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 DNAJB8Q8NHS0 232 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 GTF2H4Q92759 462 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 TP53INP1Q96A56 240 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 LRRC37BQ96QE4 947 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 GAL3ST4Q96RP7 486 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 CCDC106Q9BWC9 280 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 WWTR1Q9GZV5 400 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 MYLK2Q9H1R3 596 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 CDCP1Q9H5V8 836 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 ZNF552Q9H707 407 aaPredicted RBP13.25□□□□□ -0.29
CHD8-208ENST00000555301 SERHLQ9NQF3 203 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 MYOTQ9UBF9 498 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 VPS4AQ9UN37 437 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 PCDHGB7Q9Y5F8 929 aa13.25□□□□□ -0.29
CHD8-208ENST00000555301 ACACBO00763 2458 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 RNF103-CHMP3A0A140T963 221 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 BBIP1A8MTZ0 92 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 PRKNO60260 465 aaPredicted RBP13.24□□□□□ -0.29
CHD8-208ENST00000555301 ZCCHC18P0CG32 403 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 PRIM2P49643 509 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 MLF1P58340 268 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 PSPHP78330 225 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 STX5Q13190 355 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms