RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 RAF1P04049 648 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 FHP07954 510 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 POU2F1P14859 743 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 IMPA1P29218 277 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 TIA1P31483 386 aaKnown RBP eCLIP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 MNX1P50219 401 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 XKP51811 444 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 MXD1Q05195 221 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 COX10Q12887 443 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 TMEM115Q12893 351 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 ADAM15Q13444 863 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 DDX39BQ13838 428 aaKnown RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 TEAD2Q15562 447 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF77Q15935 545 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 FAM122CQ6P4D5 195 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 CD300LDQ6UXZ3 194 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 PDZD3Q86UT5 571 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 GALNT11Q8NCW6 608 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 OR7G3Q8NG95 312 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 OR4M2Q8NGB6 313 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 NFKBIDQ8NI38 313 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 MTERF3Q96E29 417 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 MTERF1Q99551 399 aaKnown RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC35A5Q9BS91 424 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 EFCAB11Q9BUY7 163 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 GPATCH2Q9NW75 528 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 WBP1LQ9NX94 342 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 NLKQ9UBE8 527 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 POLHQ9Y253 713 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 EXOSC1Q9Y3B2 195 aaKnown RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 PRAMEF33A0A0G2JMD5 474 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 TRBC2A0A5B9 178 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 J3KTA2 159 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 FOXE1O00358 373 aaPredicted RBP10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 BTN3A3O00478 584 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 PRAMEF10O60809 474 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 MOSPD3O75425 235 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 SNAPC5O75971 98 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 DHFRP00374 187 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 TIMP1P01033 207 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 IFNA7P01567 189 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 ELFN1P0C7U0 828 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 ETFAP13804 333 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 TNFRSF1BP20333 461 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 APEX1P27695 318 aaKnown RBP10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 MMP12P39900 470 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 SNRPD2P62316 118 aaKnown RBP10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 RAE1P78406 368 aaKnown RBP10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 RAB40BQ12829 278 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 MFSD13AQ14CX5 517 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 SEC23BQ15437 767 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 LY6G5CQ5SRR4 150 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF648Q5T619 568 aaPredicted RBP10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 HIST2H2AA3Q6FI13 130 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 TMEM220Q6QAJ8 160 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 SLCO4C1Q6ZQN7 724 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 KCTD20Q7Z5Y7 419 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 SDR16C5Q8N3Y7 309 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF680Q8NEM1 530 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 OR52I1Q8NGK6 324 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 CDC26Q8NHZ8 85 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF431Q8TF32 576 aaPredicted RBP10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 HGDQ93099 445 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 UCN3Q969E3 161 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 OR4K3Q96R72 315 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 IL4I1Q96RQ9 567 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 CRISPLD2Q9H0B8 497 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 REEP4Q9H6H4 257 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 C11orf16Q9NQ32 467 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 ZSCAN32Q9NX65 697 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 DNAJC27Q9NZQ0 273 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 NCKAP1Q9Y2A7 1128 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 DYRK1BQ9Y463 629 aa10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 SPIN1Q9Y657 262 aaPredicted RBP10.12□□□□□ -0.79
MTHFD1-210ENST00000555252 HEPACAM2A8MVW5 462 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 NPC1O15118 1278 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 SH3BP5O60239 455 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 GPR37L1O60883 481 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 TPPPO94811 219 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 CLEC2LP0C7M8 214 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 SYN1P17600 705 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 POU1F1P28069 291 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC6A1P30531 599 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 TGM4P49221 684 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 CTSCP53634 463 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 PDE7AQ13946 482 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 IL18Q14116 193 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 DCST1Q5T197 706 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 CD276Q5ZPR3 534 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 TMEM215Q68D42 235 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 SDE2Q6IQ49 451 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 LIPIQ6XZB0 460 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 IKBIPQ70UQ0 350 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF765Q7L2R6 523 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 RNF175Q8N4F7 328 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 HUS1BQ8NHY5 278 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 APOBEC4Q8WW27 367 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 UBE2E3Q969T4 207 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 TCEAL4Q96EI5 215 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF578Q96N58 590 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms