RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 GZMMP51124 257 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 EPHA4P54764 986 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 ITGA1P56199 1179 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 FADDQ13158 208 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 TUBA3CQ13748 450 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PLEKHN1Q494U1 663 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF658BQ4V348 819 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-216ENST00000554975 OTUD3Q5T2D3 398 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-216ENST00000554975 FAM69BQ5VUD6 431 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PRAMEF13Q5VWM6 474 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 SPESP1Q6UW49 350 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 ENPP6Q6UWR7 440 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 SLCO4C1Q6ZQN7 724 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 C11orf96Q7Z7L8 435 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 ZDHHC21Q8IVQ6 265 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 CISD2Q8N5K1 135 aaKnown RBP10.48□□□□□ -0.73
SHMT2-216ENST00000554975 C11orf65Q8NCR3 313 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 OR7G3Q8NG95 312 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 OR2L2Q8NH16 312 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 SLC5A11Q8WWX8 675 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 THAP4Q8WY91 577 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 MTFMTQ96DP5 389 aaKnown RBP10.48□□□□□ -0.73
SHMT2-216ENST00000554975 C11orf24Q96F05 449 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF764Q96H86 408 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-216ENST00000554975 QRFPRQ96P65 431 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PKP4Q99569 1192 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 RAB11FIP5Q9BXF6 653 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PIF1Q9H611 641 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PELI2Q9HAT8 420 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 DMRT3Q9NQL9 472 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 ENOPH1Q9UHY7 261 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 NTNG1Q9Y2I2 539 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 C21orf140B9A014 251 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 UPK1AO00322 258 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 KDM1AO60341 852 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 KCNJ13O60928 360 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 ABCB7O75027 752 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 UGT2B11O75310 529 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 TRMUO75648 421 aaKnown RBP10.47□□□□□ -0.73
SHMT2-216ENST00000554975 SNAP29O95721 258 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 CCNYL3P0C7X3 344 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 CD22P20273 847 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 SLC19A1P41440 591 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 NEK2P51955 445 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 PLIN5Q00G26 463 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 SLBPQ14493 270 aaKnown RBP eCLIP10.47□□□□□ -0.73
SHMT2-216ENST00000554975 NFE2L1Q14494 772 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 IL11RAQ14626 422 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 GTDC1Q4AE62 458 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 LRRC23Q53EV4 343 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-216ENST00000554975 THEMIS2Q5TEJ8 643 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 AP1ARQ63HQ0 302 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 SP5Q6BEB4 398 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-216ENST00000554975 OR2T5Q6IEZ7 315 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 PWWP2BQ6NUJ5 590 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 EIF3MQ7L2H7 374 aaKnown RBP10.47□□□□□ -0.73
SHMT2-216ENST00000554975 PAGE2Q7Z2X7 111 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 PIWIL3Q7Z3Z3 882 aaKnown RBP10.47□□□□□ -0.73
SHMT2-216ENST00000554975 PLXDC1Q8IUK5 500 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 ZZZ3Q8IYH5 903 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 C1orf52Q8N6N3 182 aaKnown RBP10.47□□□□□ -0.73
SHMT2-216ENST00000554975 OR2T29Q8NH02 315 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 HUS1BQ8NHY5 278 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 CDC26Q8NHZ8 85 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 ADAMTS17Q8TE56 1095 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF480Q8WV37 535 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 CHTF18Q8WVB6 975 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 NMD3Q96D46 503 aaKnown RBP10.47□□□□□ -0.73
SHMT2-216ENST00000554975 COQ8BQ96D53 544 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 FBXL20Q96IG2 436 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 MPP4Q96JB8 637 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 TGM7Q96PF1 710 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 BCL7BQ9BQE9 202 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 EBPLQ9BY08 206 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 IKZF5Q9H5V7 419 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 REEP4Q9H6H4 257 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 NTN4Q9HB63 628 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 CCNB1IP1Q9NPC3 277 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF624Q9P2J8 865 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-216ENST00000554975 USP22Q9UPT9 525 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 SNX5Q9Y5X3 404 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 CEPT1Q9Y6K0 416 aa10.47□□□□□ -0.73
SHMT2-216ENST00000554975 DNHD1Q96M86 4753 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 LILRA5A6NI73 299 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 A6NL46 340 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 ADAMDEC1O15204 470 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 SLC16A6O15403 523 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 HS6ST1O60243 411 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 OR6B1O95007 311 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 LRATO95237 230 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 KRT75O95678 551 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF682O95780 498 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 CCDC159P0C7I6 412 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 SLC35G4P0C7Q5 338 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 ERGP11308 486 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 JUNBP17275 347 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-216ENST00000554975 IGFBP5P24593 272 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 TACR1P25103 407 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 GSTM2P28161 218 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 DNAJA1P31689 397 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms