RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 MACC1Q6ZN28 852 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 Q6ZS52 159 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 KCTD9Q7L273 389 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 COX8CQ7Z4L0 72 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 C5orf24Q7Z6I8 188 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CCDC83Q8IWF9 413 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 UNC45BQ8IWX7 931 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 AQP12AQ8IXF9 295 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 KLHDC8AQ8IYD2 350 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 UBALD2Q8IYN6 164 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 TCEANCQ8N8B7 351 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ADAD2Q8NCV1 583 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 DEFB124Q8NES8 71 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 DNAJB3Q8WWF6 145 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SEPT8Q92599 483 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 FRAT1Q92837 279 aaPredicted RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 FGF14Q92915 247 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PTP4A1Q93096 173 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF486Q96H40 463 aaPredicted RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CDKN2AIPNLQ96HQ2 116 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 B3GALT6Q96L58 329 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 NEDD4LQ96PU5 975 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PRMT1Q99873 361 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 EDEM2Q9BV94 578 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CACNG6Q9BXT2 260 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 TDRD1Q9BXT4 1180 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CRNKL1Q9BZJ0 848 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 EGLN1Q9GZT9 426 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 RSPH9Q9H1X1 276 aaPredicted RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 DPEP2Q9H4A9 486 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 C5orf66Q9H5L9 145 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SLC38A10Q9HBR0 1119 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 GPR173Q9NS66 373 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 POMT2Q9UKY4 750 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PPP1R3CQ9UQK1 317 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 EXOC6BQ9Y2D4 811 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ANGPTL3Q9Y5C1 460 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CEP192Q8TEP8 1941 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PLXNB3Q9ULL4 1909 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CABIN1Q9Y6J0 2220 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 LRRK2Q5S007 2527 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ABCB11O95342 1321 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 SETD2Q9BYW2 2564 aaPredicted RBP1.3□□□□□ -2.2
PRPF39-208ENST00000554785 FLNCQ14315 2725 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 A0A087WZ39 114 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 A0A087X002 238 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 A0A1B0GU03 582 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 FAM149AA5PLN7 773 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 ANKDD1BA6NHY2 528 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 C5orf67F2Z3F1 127 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 SLC1A7O00341 560 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 TTI1O43156 1089 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 ACSL4O60488 711 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 MAGEC1O60732 1142 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 SAP30O75446 220 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 CSDE1O75534 798 aaKnown RBP1.3□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF821O75541 412 aaPredicted RBP1.3□□□□□ -2.2
PRPF39-208ENST00000554785 GLCEO94923 617 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 NXPH2O95156 264 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 GOSR1O95249 250 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 CHRNA1P02708 482 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 MT-ND2P03891 347 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 LGALS2P05162 132 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 SMIM10L2AP0DMW4 78 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 SMIM10L2BP0DMW5 78 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 CCDC192P0DO97 292 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 UROSP10746 265 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 HLA-FP30511 346 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 OPRL1P41146 370 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 SLC6A12P48065 614 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 TDO2P48775 406 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 KHKP50053 298 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 CLDN6P56747 220 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 RPP38P78345 283 aaKnown RBP1.3□□□□□ -2.2
PRPF39-208ENST00000554785 NTHL1P78549 312 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 GUCY2DQ02846 1103 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 SLC34A1Q06495 639 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 GABPAQ06546 454 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 TRA2AQ13595 282 aaKnown RBP eCLIP1.3□□□□□ -2.24e-10■□□□□ 9.3
PRPF39-208ENST00000554785 FCN2Q15485 313 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 HLA-BQ31612 363 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 ARMCX4Q5H9R4 360 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 WLSQ5T9L3 541 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 LRRC38Q5VT99 294 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 PM20D1Q6GTS8 502 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 TMEM270Q6UE05 265 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 CHMP1BQ7LBR1 199 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 SNX32Q86XE0 403 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 CHCHD4Q8N4Q1 142 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 MSANTD4Q8NCY6 345 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 OR5T2Q8NGG2 359 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 OR4D10Q8NGI6 311 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 OR2T6Q8NHC8 308 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 C2orf48Q96LS8 159 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 CCDC43Q96MW1 224 aaKnown RBP1.3□□□□□ -2.2
PRPF39-208ENST00000554785 RASL10BQ96S79 203 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 IL12RB2Q99665 862 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 ASCL2Q99929 193 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 SYT15Q9BQS2 421 aa1.3□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF559Q9BR84 538 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms