RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 FAM71CQ8NEG0 241 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 MIPOL1Q8TD10 442 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 DQX1Q8TE96 717 aaKnown RBP2.54□□□□□ -2
SCFD1-213ENST00000554776 GTF3AQ92664 365 aaKnown RBP2.54□□□□□ -2
SCFD1-213ENST00000554776 C11orf52Q96A22 123 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 C14orf79Q96F83 325 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 CAPNS2Q96L46 248 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 ANKRD27Q96NW4 1050 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 AGAP3Q96P47 875 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 LGMNQ99538 433 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 PYGO2Q9BRQ0 406 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 NDUFAF3Q9BU61 184 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 APOOQ9BUR5 198 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 CARD6Q9BX69 1037 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 NMNAT2Q9BZQ4 307 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 STRADBQ9C0K7 418 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 ALG9Q9H6U8 611 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 GDAP2Q9NXN4 497 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 GTSE1Q9NYZ3 720 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 P2RX2Q9UBL9 471 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 MUTYHQ9UIF7 546 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 BLOC1S6Q9UL45 172 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 AP1M2Q9Y6Q5 423 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 A0A0J9YVX5 310 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 A0A1B0GVY2 172 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 ASB14A6NK59 587 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 RPL37AP8A6NKH3 93 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 ANKRD30BLA7E2S9 258 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 E9PQ18 207 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 F8WDY8 70 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 H0YL77 283 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 CFLARO15519 480 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 SDC3O75056 442 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 VPS26AO75436 327 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 TOM1L1O75674 476 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 MBD3O95983 291 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 GOT2P00505 430 aaKnown RBP2.53□□□□□ -2
SCFD1-213ENST00000554776 PTMAP06454 111 aaKnown RBP2.53□□□□□ -2
SCFD1-213ENST00000554776 CCDC159P0C7I6 412 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 RRASP10301 218 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 UCP1P25874 307 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 CCND2P30279 289 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 MATKP42679 507 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 MAGEA4P43358 317 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 SLC1A6P48664 564 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 TRPC1P48995 793 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 LMO4P61968 165 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 CDKL1Q00532 357 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 SRYQ05066 204 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 RAPSNQ13702 412 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 SNAI3Q3KNW1 292 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 GLIPR1L2Q4G1C9 344 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 HSP90AA5PQ58FG0 334 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 MUC21Q5SSG8 566 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 PNCKQ6P2M8 343 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 ADAMTSL5Q6ZMM2 481 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 NUFIP2Q7Z417 695 aaKnown RBP2.53□□□□□ -2
SCFD1-213ENST00000554776 GPR142Q7Z601 462 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 RPAINQ86UA6 219 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 ARFGAP2Q8N6H7 521 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 BCORP1Q8N888 145 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 ZNF781Q8N8C0 355 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 SUMF1Q8NBK3 374 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 OR1B1Q8NGR6 318 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 OR52J3Q8NH60 311 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 WDR36Q8NI36 951 aaKnown RBP2.53□□□□□ -2
SCFD1-213ENST00000554776 CCDC51Q96ER9 411 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 ZNF597Q96LX8 424 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 TSGA13Q96PP4 275 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 UBXN6Q9BZV1 441 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 LRRCC1Q9C099 1032 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 RNF41Q9H4P4 317 aaPredicted RBP2.53□□□□□ -2
SCFD1-213ENST00000554776 FAM124BQ9H5Z6 455 aaPredicted RBP2.53□□□□□ -2
SCFD1-213ENST00000554776 MOB1AQ9H8S9 216 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 ECT2Q9H8V3 914 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 Q9HAA7 133 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 VAT1LQ9HCJ6 419 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 POLE3Q9NRF9 147 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 ZNF446Q9NWS9 450 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 THYN1Q9P016 225 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 RCOR3Q9P2K3 495 aaPredicted RBP2.53□□□□□ -2
SCFD1-213ENST00000554776 ATXN10Q9UBB4 475 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 TUBGCP4Q9UGJ1 667 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 BCAP29Q9UHQ4 241 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.53□□□□□ -2
SCFD1-213ENST00000554776 FZR1Q9UM11 496 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 MGAT4AQ9UM21 535 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 MGAT4BQ9UQ53 548 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 SLC9A8Q9Y2E8 581 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 RNF115Q9Y4L5 304 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 AUP1Q9Y679 476 aa2.53□□□□□ -2
SCFD1-213ENST00000554776 FER1L5A0AVI2 2057 aa2.53□□□□□ -2.01
SCFD1-213ENST00000554776 NCAPD2Q15021 1401 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 IGLV4-3A0A075B6K6 122 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 IGHV3OR16-10A0A075B7F0 116 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 FAM230AA0A1W2PPH8 454 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 PDXKO00764 312 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 EI24O14681 340 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 IMPA2O14732 288 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms