RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 DIAPH2O60879 1101 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 FAM20BO75063 409 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CSO75390 466 aaKnown RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 ATP6AP2O75787 350 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 DNAJB5O75953 348 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 RSL1D1O76021 490 aaKnown RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 ZFPL1O95159 310 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 FAM107AO95990 144 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CHEK2O96017 543 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SERPIND1P05546 499 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SERPINA6P08185 405 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 PRR35P0CG20 571 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SMIM10L1P0DMW3 83 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 TROVE2P10155 538 aaKnown RBP eCLIP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CDK4P11802 303 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CEACAM1P13688 526 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 GSTM2P28161 218 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 EPHA3P29320 983 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 HNRNPH1P31943 449 aaKnown RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 AQP5P55064 265 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SOX8P57073 446 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CBX1P83916 185 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 TBL3Q12788 808 aaKnown RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 TUBB3Q13509 450 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CUL3Q13618 768 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 KIAA0040Q15053 153 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 IMPG1Q17R60 797 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 ISXQ2M1V0 245 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 HKDC1Q2TB90 917 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 ADPRMQ3LIE5 342 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CRB2Q5IJ48 1285 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 TOR1AIP1Q5JTV8 583 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 WASHC2DQ5SRD0 308 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 DEPDC1Q5TB30 811 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 HES3Q5TGS1 186 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 GDF7Q7Z4P5 450 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SPATA21Q7Z572 469 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 PIGWQ7Z7B1 504 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CPLX4Q7Z7G2 160 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 ASPGQ86U10 573 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 Q8N1X5 172 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CSNK1A1LQ8N752 337 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 BMPERQ8N8U9 685 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 GBP7Q8N8V2 638 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CAMKVQ8NCB2 501 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 OR56A1Q8NGH5 318 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 OR1L3Q8NH93 324 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 ACTRT2Q8TDY3 377 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 UTP15Q8TED0 518 aaKnown RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SLC13A3Q8WWT9 602 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CCT6BQ92526 530 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 RERGQ96A58 199 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF501Q96CX3 271 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 MS4A6EQ96DS6 147 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 C11orf24Q96F05 449 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CMTM7Q96FZ5 175 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 APIPQ96GX9 242 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SMIM10Q96HG1 83 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 C10orf90Q96M02 699 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 QRFPRQ96P65 431 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SORCS2Q96PQ0 1159 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 OR52B2Q96RD2 323 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CCT8L2Q96SF2 557 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SERPINI1Q99574 410 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CCT7Q99832 543 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 TMEM120AQ9BXJ8 343 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF717Q9BY31 904 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SPRTNQ9H040 489 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 NSRP1Q9H0G5 558 aaKnown RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 WDR55Q9H6Y2 383 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 LRTM1Q9HBL6 345 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 LHX9Q9NQ69 397 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 FGF21Q9NSA1 209 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 STARD5Q9NSY2 213 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 RLIMQ9NVW2 624 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 OCIAD1Q9NX40 245 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 DLL3Q9NYJ7 618 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 VPS29Q9UBQ0 182 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 DKK2Q9UBU2 259 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SLC12A4Q9UP95 1085 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 MRPS2Q9Y399 296 aaKnown RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 PCDHGB6Q9Y5F9 930 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 CCDC88CQ9P219 2028 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 AHCTF1Q8WYP5 2266 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 A0A0G2JN53 185 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 A0A0G2JND7 137 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 EFCAB7A8K855 629 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 TMX2-CTNND1H3BSU7 103 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 SAP18O00422 153 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 RTCAO00442 366 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 PLPP1O14494 284 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 ERI3O43414 337 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 RGS14O43566 566 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 PEX11AO75192 247 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 VPS4BO75351 444 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 EEDO75530 441 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 SEMA3DO95025 777 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 SCAF4O95104 1147 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 KCNK5O95279 499 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 EIF2S1P05198 315 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms