RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 Q7L0L9 218 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 GRAMD2AQ8IUY3 354 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 ASCC1Q8N9N2 400 aaKnown RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 PIK3C3Q8NEB9 887 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 TSTD1Q8NFU3 115 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 OR6F1Q8NGZ6 308 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SLC37A2Q8TED4 501 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SLC38A5Q8WUX1 472 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 XAGE5Q8WWM1 108 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 UBE2FQ969M7 185 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 OR2A14Q96R47 310 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 SLIRPQ9GZT3 109 aaKnown RBP11.03□□□□□ -0.64
SHMT2-212ENST00000554467 REEP1Q9H902 201 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 TM9SF3Q9HD45 589 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 AMBNQ9NP70 447 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 NDUFAF4Q9P032 175 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 AP1M2Q9Y6Q5 423 aa11.03□□□□□ -0.64
SHMT2-212ENST00000554467 ASXL3Q9C0F0 2248 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 B4DGG1 531 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 CDH12P55289 794 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 ID2Q02363 134 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 EEF1A2Q05639 463 aaKnown RBP11.02□□□□□ -0.64
SHMT2-212ENST00000554467 SMAD4Q13485 552 aaKnown RBP11.02□□□□□ -0.64
SHMT2-212ENST00000554467 C6orf141Q5SZD1 244 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 FBXO42Q6P3S6 717 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 SHQ1Q6PI26 577 aaKnown RBP11.02□□□□□ -0.64
SHMT2-212ENST00000554467 TMEM107Q6UX40 140 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 PRSS41Q7RTY9 318 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 GLRX5Q86SX6 157 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 OR2L5Q8NG80 312 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 OR5P2Q8WZ92 322 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 COL26A1Q96A83 441 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 CNRIP1Q96F85 164 aaPredicted RBP11.02□□□□□ -0.64
SHMT2-212ENST00000554467 AMDHD1Q96NU7 426 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 KCNC2Q96PR1 638 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 WFDC6Q9BQY6 131 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 NT5DC2Q9H857 520 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 SLC35C2Q9NQQ7 365 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 EVA1BQ9NVM1 165 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 CPNE7Q9UBL6 633 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 MRPS2Q9Y399 296 aaKnown RBP11.02□□□□□ -0.64
SHMT2-212ENST00000554467 ASB4Q9Y574 426 aa11.02□□□□□ -0.64
SHMT2-212ENST00000554467 LOC100130705A0A1B0GUX0 176 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 FAM227AF5H4B4 570 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 KCNJ13O60928 360 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 FADS2O95864 444 aaKnown RBP11.02□□□□□ -0.65
SHMT2-212ENST00000554467 CTSBP07858 339 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 POU2F1P14859 743 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 ACVR2AP27037 513 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 PPM1FP49593 454 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-212ENST00000554467 PPP5CP53041 499 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 TDGQ13569 410 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 RAPSNQ13702 412 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 FZD2Q14332 565 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 TEAD4Q15561 434 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 LTB4RQ15722 352 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 SYPL1Q16563 259 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 SMN1Q16637 294 aaKnown RBP11.02□□□□□ -0.65
SHMT2-212ENST00000554467 DEFB110Q30KQ9 67 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 ATAD3CQ5T2N8 411 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 KIAA0895LQ68EN5 471 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 PAQR7Q86WK9 346 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 HIPK1Q86Z02 1210 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 LACC1Q8IV20 430 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 NLGN4XQ8N0W4 816 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 FAM46DQ8NEK8 389 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 IL17RDQ8NFM7 739 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 ASB12Q8WXK4 309 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 ZBED6CLQ96FA7 236 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-212ENST00000554467 TMEM19Q96HH6 336 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 OR2B2Q9GZK3 357 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 ZCCHC3Q9NUD5 404 aaKnown RBP11.02□□□□□ -0.65
SHMT2-212ENST00000554467 RLIMQ9NVW2 624 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 PRAMEF26H0Y7S4 382 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 H0YAE9 185 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 BCKDKO14874 412 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 HCRTR1O43613 425 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 GABARAPO95166 117 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 TNFP01375 233 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 SRFP11831 508 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 CTSEP14091 401 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 NCS1P62166 190 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 ABATP80404 500 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 CDONQ4KMG0 1287 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 SIMC1Q8NDZ2 872 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 CHDHQ8NE62 594 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-212ENST00000554467 VANGL1Q8TAA9 524 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-212ENST00000554467 FLVCR1-AS1Q8TAF5 88 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 KAT2AQ92830 837 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 C16orf58Q96GQ5 468 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 NODALQ96S42 347 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 ACTR10Q9NZ32 417 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 C3orf18Q9UK00 162 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 SNX7Q9UNH6 387 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 MAU2Q9Y6X3 613 aa11.02□□□□□ -0.65
SHMT2-212ENST00000554467 A0A0G2JMP0 313 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 PRAMEF27A3QJZ7 478 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 C5orf58C9J3I9 102 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 HMGN4O00479 90 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 MAN2B1O00754 1011 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms