RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TRIM46Q7Z4K8 759 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 SAMD14Q8IZD0 417 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 MMP21Q8N119 569 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 GHDCQ8N2G8 530 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 LRRC25Q8N386 305 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 VWA5B2Q8N398 1253 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 OR7G1Q8NGA0 311 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 C16orf52Q8NHV5 167 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 RELTQ969Z4 430 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 SPACA9Q96E40 222 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 METTL2AQ96IZ6 378 aaKnown RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 MECRQ9BV79 373 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 NPHS2Q9NP85 383 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 SACM1LQ9NTJ5 587 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 EHD3Q9NZN3 535 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 UTS2RQ9UKP6 389 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 DLGAP4Q9Y2H0 992 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF780BQ9Y6R6 833 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 EXPH5Q8NEV8 1989 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 CROCCQ5TZA2 2017 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 TRGV8A0A0C4DH27 118 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 C2orf92A0A1B0GVN3 265 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 CFAP73A6NFT4 308 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 ACOT7O00154 380 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 AZIN1O14977 448 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 ASNA1O43681 348 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 ATP5HO75947 161 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 ANXA4P09525 319 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-211ENST00000554310 CT62P0C5K7 136 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 GRK2P25098 689 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 SERPINB3P29508 390 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 FEN1P39748 380 aaKnown RBP12.06□□□□□ -0.48
SHMT2-211ENST00000554310 CA7P43166 264 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF763Q0D2J5 394 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 STX3Q13277 289 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 PRICKLE4Q2TBC4 344 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF791Q3KP31 576 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-211ENST00000554310 C1QL3Q5VWW1 255 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 HLA-DQA1Q5Y7H0 255 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 MTFR2Q6P444 385 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 SCIMPQ6UWF3 145 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 RNF165Q6ZSG1 346 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 TAGAPQ8N103 731 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF615Q8N8J6 731 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 C17orf47Q8NEP4 570 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 OR2M7Q8NG81 312 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 RFWD2Q8NHY2 731 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 DOK4Q8TEW6 326 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 TP53INP1Q96A56 240 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 CNRIP1Q96F85 164 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-211ENST00000554310 LRRC37BQ96QE4 947 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 FAM173AQ9BQD7 235 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 SIKE1Q9BRV8 207 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 GATA5Q9BWX5 397 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-211ENST00000554310 EBPLQ9BY08 206 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 OR10A5Q9H207 317 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 TNFRSF12AQ9NP84 129 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 DEPPQ9NTK1 212 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 GIMAP4Q9NUV9 329 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 THAP1Q9NVV9 213 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 MAT2BQ9NZL9 334 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 HEY2Q9UBP5 337 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 SUCOQ9UBS9 1254 aaKnown RBP12.06□□□□□ -0.48
SHMT2-211ENST00000554310 CFL2Q9Y281 166 aa12.06□□□□□ -0.48
SHMT2-211ENST00000554310 MYO7BQ6PIF6 2116 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 A0A0G2JMM0 328 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 A0A1W2PPB8 328 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 A0A1W2PRS3 328 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 KIR3DP1A8MWS1 328 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 NPIPB8E9PQR5 432 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 H0YHG0 523 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 NPHS1O60500 1241 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 CHEK2O96017 543 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 P04436 131 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 SERPINE1P05121 402 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 FBXO45P0C2W1 286 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 PRPH2P23942 346 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 SERPINB5P36952 375 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 RFC3P40938 356 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 TMED10P49755 219 aaKnown RBP12.05□□□□□ -0.48
SHMT2-211ENST00000554310 ARFIP2P53365 341 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 NCALDP61601 193 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 MAP4K2Q12851 820 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF750Q32MQ0 723 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 KANK2Q63ZY3 851 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 LYPD8Q6UX82 237 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 Q6ZPB1 254 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-211ENST00000554310 IKBIPQ70UQ0 350 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 FJX1Q86VR8 437 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 SLC22A16Q86VW1 577 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF675Q8TD23 568 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 PAQR8Q8TEZ7 354 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 C16orf78Q8WTQ4 265 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 CTHRC1Q96CG8 243 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 ERP27Q96DN0 273 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 THOC1Q96FV9 657 aaKnown RBP12.05□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF681Q96N22 645 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 BRINP2Q9C0B6 783 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 MYLK2Q9H1R3 596 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms