RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 OR14A16Q8NHC5 309 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 PNPT1Q8TCS8 783 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 ADAMTS14Q8WXS8 1223 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 KAT2AQ92830 837 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 DAZLQ92904 295 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 STMN2Q93045 179 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 PMEPA1Q969W9 287 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 GIMAP5Q96F15 307 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 FBXL20Q96IG2 436 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 LRGUKQ96M69 825 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 NSMCE2Q96MF7 247 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 SPSB2Q99619 263 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 ACTRT3Q9BYD9 372 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 SPRY4Q9C004 299 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 GORASP2Q9H8Y8 452 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 A4GALTQ9NPC4 353 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 NECTIN3Q9NQS3 549 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 DUSP22Q9NRW4 184 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 GIN1Q9NXP7 522 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 C19orf25Q9UFG5 118 aaPredicted RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 RAPGEFL1Q9UHV5 662 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 GPN3Q9UHW5 284 aaPredicted RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 ZNF639Q9UID6 485 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 PACSIN3Q9UKS6 424 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 CDV3Q9UKY7 258 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 FAF1Q9UNN5 650 aaPredicted RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 PCDHGB3Q9Y5G1 929 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 SPEGQ15772 3267 aa7.15□□□□□ -1.27
TDP1-209ENST00000554180 FER1L5A0AVI2 2057 aa7.15□□□□□ -1.27
TDP1-209ENST00000554180 A0A1W2PNU3 283 aaPredicted RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 TCRBV3S1A0A5B6 114 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 IDSB3KWA1 339 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 C9orf172C9J069 976 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 AGRPO00253 132 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 HMGN4O00479 90 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CXCR6O00574 342 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 GSTA4O15217 222 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 ALOX12BO75342 701 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 FKBP6O75344 327 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 ENTPD5O75356 428 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CBX7O95931 251 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 AK1P00568 194 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 IFNA16P05015 189 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 C8BP07358 591 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 HEXBP07686 556 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 RAB40ALP0C0E4 278 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CCNYL3P0C7X3 344 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 ARAFP10398 606 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 UMPSP11172 480 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 ETFAP13804 333 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 S1PR1P21453 382 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 MATN1P21941 496 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 SLC5A2P31639 672 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 MSX2P35548 267 aaPredicted RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 NUP214P35658 2090 aaPredicted RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 MAN2A2P49641 1150 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CLDN6P56747 220 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 PSPHP78330 225 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 RHDQ02161 417 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 EEF1A2Q05639 463 aaKnown RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 TARDBPQ13148 414 aaKnown RBP eCLIP7.14□□□□□ -1.27
TDP1-209ENST00000554180 COL9A2Q14055 689 aaPredicted RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 CCNIQ14094 377 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 LASP1Q14847 261 aaKnown RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 TRMT12Q53H54 448 aaKnown RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 C3orf38Q5JPI3 329 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 IRAK1BP1Q5VVH5 260 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 GLYATQ6IB77 296 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CDC73Q6P1J9 531 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 TNFAIP8L2Q6P589 184 aaPredicted RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 AAGABQ6PD74 315 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 FAM111BQ6SJ93 734 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 C6orf15Q6UXA7 325 aaPredicted RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 CCDC80Q76M96 950 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 TMPRSS7Q7RTY8 843 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 TMEM151BQ8IW70 566 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 EID3Q8N140 333 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 HORMAD2Q8N7B1 307 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CDRT4Q8N9R6 151 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 GALNT6Q8NCL4 622 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 HIPK4Q8NE63 616 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 BHLHE22Q8NFJ8 381 aaPredicted RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 PTPMT1Q8WUK0 201 aaPredicted RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 METTL21AQ8WXB1 218 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 HOXB13Q92826 284 aaPredicted RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 MR1Q95460 341 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 TSLPQ969D9 159 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 NCLNQ969V3 563 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 PPWD1Q96BP3 646 aaKnown RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 DUS3LQ96G46 650 aaKnown RBP7.14□□□□□ -1.27
TDP1-209ENST00000554180 RNF145Q96MT1 663 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 STACQ99469 402 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CRB3Q9BUF7 120 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 PCDHAC1Q9H158 963 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 RASSF4Q9H2L5 321 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 SERHL2Q9H4I8 314 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 POLR1BQ9H9Y6 1135 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 OLAHQ9NV23 265 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 EXD2Q9NVH0 621 aa7.14□□□□□ -1.27
TDP1-209ENST00000554180 CALML5Q9NZT1 146 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms