RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 GDF11O95390 407 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SOD1P00441 154 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 IGF2P01344 180 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 IFNGP01579 166 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 WARSP23381 471 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 VAMP1P23763 118 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 ARL2P36404 184 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SCNN1AP37088 669 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CCR6P51684 374 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SEC61A1P61619 476 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 JAG1P78504 1218 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 HTR4Q13639 388 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SMCO1Q147U7 214 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 PTGES3Q15185 160 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 TARBP2Q15633 366 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 SGO1Q5FBB7 561 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CD200R1LQ6Q8B3 271 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 UQCC3Q6UW78 93 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 PLEKHH3Q7Z736 793 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 LDB1Q86U70 411 aaPredicted RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 MISPQ8IVT2 679 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SPICQ8N5J4 248 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 C1orf127Q8N9H9 656 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 RELL2Q8NC24 303 aaPredicted RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 OR56A4Q8NGH8 313 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 OR10K1Q8NGX5 313 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 DNAJB8Q8NHS0 232 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 BRI3BPQ8WY22 251 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 TADA1Q96BN2 335 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 RBM18Q96H35 190 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 RHOVQ96L33 236 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 C12orf66Q96MD2 445 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 HS6ST2Q96MM7 605 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 ZNF382Q96SR6 550 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SSX3Q99909 188 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 C7orf50Q9BRJ6 194 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 INPP5KQ9BT40 448 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CACNG6Q9BXT2 260 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 RERGLQ9H628 205 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CHMP1AQ9HD42 196 aaPredicted RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 CYSLTR2Q9NS75 346 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 TAS2R3Q9NYW6 316 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 LAMP5Q9UJQ1 280 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 NUP214P35658 2090 aaPredicted RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 LTBP1Q14766 1721 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 KIAA1671Q9BY89 1806 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 A0A1W2PPE3 182 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 TMEM218A2RU14 115 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 AGAP14A8MT82 685 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 HMSDA8MTL9 139 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 FAM72CH0Y354 149 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 KLK8O60259 260 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 PEX11BO96011 259 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 C1QCP02747 245 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 GAAP10253 952 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 TYRP14679 529 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CNR2P34972 360 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 RAP2BP61225 183 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 PITX1P78337 314 aaPredicted RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 E2F1Q01094 437 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 PDZK1IP1Q13113 114 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 C1DQ13901 141 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 DUOXA1Q1HG43 343 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 VMACQ2NL98 169 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CDNFQ49AH0 187 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CRTC2Q53ET0 693 aaPredicted RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 INTS6LQ5JSJ4 861 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 FAM72AQ5TYM5 149 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CYB5R2Q6BCY4 276 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 OR5M10Q6IEU7 315 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 FAM72DQ6L9T8 149 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SERPINA11Q86U17 422 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 FAM72BQ86X60 149 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 GPR135Q8IZ08 494 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SPAG16Q8N0X2 631 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 LGI4Q8N135 537 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 KRTCAP2Q8N6L1 136 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SELENOMQ8WWX9 145 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 VOPP1Q96AW1 172 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 WDR89Q96FK6 387 aaPredicted RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 MEGF10Q96KG7 1140 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 OR52E6Q96RD3 313 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 HBEGFQ99075 208 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 EDEM2Q9BV94 578 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 DPY30Q9C005 99 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 EGLN1Q9GZT9 426 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 TWSG1Q9GZX9 223 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 DUSP15Q9H1R2 295 aaPredicted RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 TCF7L1Q9HCS4 588 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CA10Q9NS85 328 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 RASL12Q9NYN1 266 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 FEM1BQ9UK73 627 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CARHSP1Q9Y2V2 147 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 AAR2Q9Y312 384 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 CCL27Q9Y4X3 112 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 SPIN1Q9Y657 262 aaPredicted RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 SCN1AP35498 2009 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 COLCA2A8K830 154 aa9.04□□□□□ -0.96
SIX4-202ENST00000554079 TMEM229AB2RXF0 380 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms