RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 B3GNT7Q8NFL0 401 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 ADCY4Q8NFM4 1077 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 OR7G2Q8NG99 324 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 OR5AK3PQ8NH89 298 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 SLC2A12Q8TD20 617 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 KAT2AQ92830 837 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 VMP1Q96GC9 406 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 SLC39A3Q9BRY0 314 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 MUC13Q9H3R2 512 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 AKIRIN1Q9H9L7 192 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-210ENST00000553950 GIN1Q9NXP7 522 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 TMEM181Q9P2C4 612 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 DKK4Q9UBT3 224 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 PPIEQ9UNP9 301 aaKnown RBP13.53□□□□□ -0.24
SHMT2-210ENST00000553950 WASF3Q9UPY6 502 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 ERVK-19Q9WJR5 959 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 ZNF451Q9Y4E5 1061 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 PCDHGB3Q9Y5G1 929 aa13.53□□□□□ -0.24
SHMT2-210ENST00000553950 LOC101059948A0A1B0GTJ6 334 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 CFAP73A6NFT4 308 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 FAM220BPB1ANY3 271 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 UPK1AO00322 258 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 AK1P00568 194 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 ADRB1P08588 477 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 ICAM2P13598 275 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 GPX2P18283 190 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 MTPNP58546 118 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 DCAF7P61962 342 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 MRPS35P82673 323 aaKnown RBP13.52□□□□□ -0.25
SHMT2-210ENST00000553950 BNIP2Q12982 314 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 CYP51A1Q16850 503 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 GTDC1Q4AE62 458 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 ATAD3BQ5T9A4 648 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 FHL5Q5TD97 284 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 MFSD12Q6NUT3 480 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 CDC73Q6P1J9 531 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 FAM111BQ6SJ93 734 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 ASRGL1Q7L266 308 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 SLC29A4Q7RTT9 530 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 GPR155Q7Z3F1 870 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 C6orf120Q7Z4R8 191 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 MSRB3Q8IXL7 192 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 LGI4Q8N135 537 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 METTL25Q8N6Q8 603 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 ZNF248Q8NDW4 579 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 OR1N1Q8NGS0 311 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 SNIP1Q8TAD8 396 aaKnown RBP13.52□□□□□ -0.25
SHMT2-210ENST00000553950 PTPMT1Q8WUK0 201 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-210ENST00000553950 FGF11Q92914 225 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 TMEM125Q96AQ2 219 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 PPWD1Q96BP3 646 aaKnown RBP13.52□□□□□ -0.25
SHMT2-210ENST00000553950 MAGED4Q96JG8 741 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 STACQ99469 402 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 ACTRT3Q9BYD9 372 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 TRIM4Q9C037 500 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 OR8D2Q9GZM6 311 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 ZNF700Q9H0M5 742 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 ALG2Q9H553 416 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 SLAMF8Q9P0V8 285 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 BCAP29Q9UHQ4 241 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 HS3ST3B1Q9Y662 390 aa13.52□□□□□ -0.25
SHMT2-210ENST00000553950 IGHV1-45A0A0A0MS14 117 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 NSG1A0A0A6YYJ2 146 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 CREG1O75629 220 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 CBX7O95931 251 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 HPP00738 406 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 IGKV3-11P04433 115 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 HMGN2P05204 90 aaKnown RBP13.51□□□□□ -0.25
SHMT2-210ENST00000553950 BMP2P12643 396 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 HSD17B1P14061 328 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-210ENST00000553950 OTX2P32243 289 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 PGM1P36871 562 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 CRATP43155 626 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 EFNA3P52797 238 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 PRKAG1P54619 331 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 SLC26A5P58743 744 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 DSTNP60981 165 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 RBBP4Q09028 425 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 MGAT2Q10469 447 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 LASP1Q14847 261 aaKnown RBP13.51□□□□□ -0.25
SHMT2-210ENST00000553950 RGNQ15493 299 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 CRTC2Q53ET0 693 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-210ENST00000553950 GCNT6Q5T4J0 391 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 NDUFAF7Q7L592 441 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 RNF130Q86XS8 419 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 SHISA5Q8N114 240 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 C17orf47Q8NEP4 570 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 OR52R1Q8NGF1 315 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 OR8K3Q8NH51 312 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 FBXO27Q8NI29 283 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 KCNE4Q8WWG9 221 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 JADE3Q92613 823 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 AURKBQ96GD4 344 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-210ENST00000553950 SENP5Q96HI0 755 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-210ENST00000553950 REXO5Q96IC2 774 aaKnown RBP13.51□□□□□ -0.25
SHMT2-210ENST00000553950 THTPAQ9BU02 230 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 DPH1Q9BZG8 443 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 SEMA4CQ9C0C4 833 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 OR10A5Q9H207 317 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms