RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 PRKNO60260 465 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-209ENST00000553949 BCAS2O75934 225 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-209ENST00000553949 DNAJB5O75953 348 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 ZFAND5O76080 213 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 ITGB2P05107 769 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 CDKN2CP42773 168 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 CCL11P51671 97 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 RNF4P78317 190 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 MAPRE2Q15555 327 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 TBR1Q16650 682 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 ST3GAL2Q16842 350 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 SPDYE7PQ495Y7 208 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 IRAK1BP1Q5VVH5 260 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 TMEM64Q6YI46 380 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 TREML1Q86YW5 311 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 C9orf40Q8IXQ3 194 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 OR8K3Q8NH51 312 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 GOT1L1Q8NHS2 421 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-209ENST00000553949 C16orf52Q8NHV5 167 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 BRIX1Q8TDN6 353 aaKnown RBP11.37□□□□□ -0.59
SHMT2-209ENST00000553949 PSMF1Q92530 271 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 GTF2H4Q92759 462 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 FAM120BQ96EK7 910 aaKnown RBP11.37□□□□□ -0.59
SHMT2-209ENST00000553949 LRRC37BQ96QE4 947 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 SLC25A23Q9BV35 468 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 DEFB126Q9BYW3 111 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 C3orf14Q9HBI5 128 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 NTMQ9P121 344 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 PRODH2Q9UF12 536 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 NDUFAF1Q9Y375 327 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 ACACBO00763 2458 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 ANKRD11Q6UB99 2663 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-209ENST00000553949 LOC100653049A0A140TA62 436 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 CAPN14A8MX76 684 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 EMC8O43402 210 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 COQ9O75208 318 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 NME6O75414 186 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-209ENST00000553949 KRT34O76011 436 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 PSMG1O95456 288 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 GSNP06396 782 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 SOAT1P35610 550 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 CCT3P49368 545 aaKnown RBP11.36□□□□□ -0.59
SHMT2-209ENST00000553949 EMDP50402 254 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 PRKAG1P54619 331 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 PRR5P85299 388 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 GAB1Q13480 694 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 MYBPC3Q14896 1274 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 PAGE3Q5JUK9 113 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 C6orf10Q5SRN2 563 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 H3F3CQ6NXT2 135 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 C19orf48Q6RUI8 117 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 DNAJC14Q6Y2X3 702 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-209ENST00000553949 SLC29A4Q7RTT9 530 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 GPR155Q7Z3F1 870 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 SZRD1Q7Z422 152 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 SNX32Q86XE0 403 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 CLEC4FQ8N1N0 589 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 SLC5A8Q8N695 610 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 SIRT6Q8N6T7 355 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 NUP43Q8NFH3 380 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 OR56A1Q8NGH5 318 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 OR5L2Q8NGL0 311 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 NUBPLQ8TB37 319 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 SFXN5Q8TD22 340 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 MOAP1Q96BY2 351 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 MS4A4EQ96PG1 132 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 GAL3ST4Q96RP7 486 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 ZCCHC3Q9NUD5 404 aaKnown RBP11.36□□□□□ -0.59
SHMT2-209ENST00000553949 GPR83Q9NYM4 423 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 LEF1Q9UJU2 399 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-209ENST00000553949 VPS4AQ9UN37 437 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 CFL2Q9Y281 166 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 DTX4Q9Y2E6 619 aa11.36□□□□□ -0.59
SHMT2-209ENST00000553949 HEMK1Q9Y5R4 338 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-209ENST00000553949 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 A0A096LPI6 279 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 RNF103-CHMP3A0A140T963 221 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 C2orf92A0A1B0GVN3 265 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 TMEM200CA6NKL6 621 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 BBIP1A8MTZ0 92 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 FBP2O00757 339 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 CEACAM4O75871 244 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 ANP32DO95626 131 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 UQCRC2P22695 453 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 PTPN6P29350 595 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 TRPC1P48995 793 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 CBX1P83916 185 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 RAPSNQ13702 412 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 CYLC2Q14093 348 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-209ENST00000553949 EBPQ15125 230 aaKnown RBP11.35□□□□□ -0.59
SHMT2-209ENST00000553949 COQ5Q5HYK3 327 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 CRB2Q5IJ48 1285 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 B3GNTL1Q67FW5 361 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-209ENST00000553949 FCRLBQ6BAA4 426 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 TCTN3Q6NUS6 607 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 BHLHB9Q6PI77 547 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 ZNF621Q6ZSS3 439 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 RETREG3Q86VR2 466 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 RPS19BP1Q86WX3 136 aaKnown RBP11.35□□□□□ -0.59
SHMT2-209ENST00000553949 FITM2Q8N6M3 262 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms