RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ALAS2P22557 587 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 UQCRC2P22695 453 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 GPC1P35052 558 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 SOAT1P35610 550 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 CDKN2CP42773 168 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 NCBP2P52298 156 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHMT2-208ENST00000553868 HBA1P69905 142 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 CEACAM7Q14002 265 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 MAP7Q14244 749 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 MPEG1Q2M385 716 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 RABL3Q5HYI8 236 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 PPP1R3BQ86XI6 285 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 HPS6Q86YV9 775 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 TMEM126BQ8IUX1 230 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 ZNF595Q8IYB9 648 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 OR5T3Q8NGG3 340 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 CCDC124Q96CT7 223 aaKnown RBP13.54□□□□□ -0.24
SHMT2-208ENST00000553868 EFHD1Q9BUP0 239 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 ASPSCR1Q9BZE9 553 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 ALG2Q9H553 416 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 CMTM6Q9NX76 183 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 SLC25A37Q9NYZ2 338 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 CD300AQ9UGN4 299 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 GMEB1Q9Y692 573 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 NIPBLQ6KC79 2804 aaeCLIP13.54□□□□□ -0.24
SHMT2-208ENST00000553868 TACC2O95359 2948 aa13.54□□□□□ -0.24
SHMT2-208ENST00000553868 GMNNO75496 209 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 PRKRAO75569 313 aaKnown RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 SLITRK5O94991 958 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 BMP10O95393 424 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 MED26O95402 600 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 GPR75O95800 540 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 ABCB1P08183 1280 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 FGF5P12034 268 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 HOXB9P17482 250 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 EFNA1P20827 205 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 FBLP22087 321 aaKnown RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 PTPN6P29350 595 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 CHI3L1P36222 383 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 MAGEA8P43361 318 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 GCGRP47871 477 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 MTPNP58546 118 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 SNRPNP63162 240 aaKnown RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 ELF3P78545 371 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 LIPEQ05469 1076 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 ABHD18Q0P651 414 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 TRAP1Q12931 704 aaKnown RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 BIKQ13323 160 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 DSG2Q14126 1118 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 CEBPEQ15744 281 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 SPDYE7PQ495Y7 208 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 SP5Q6BEB4 398 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 RHBDD2Q6NTF9 364 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 BHLHB9Q6PI77 547 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 MSRB3Q8IXL7 192 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 LRRC25Q8N386 305 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 BMPERQ8N8U9 685 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 Q8NA96 180 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 PSMA8Q8TAA3 256 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 JADE3Q92613 823 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 MOAP1Q96BY2 351 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 TBC1D20Q96BZ9 403 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 ASB9Q96DX5 294 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 FAM120BQ96EK7 910 aaKnown RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 AMDHD1Q96NU7 426 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 OR1F2PQ96R84 312 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 CSF3RQ99062 836 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 KCTD14Q9BQ13 255 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 DPH2Q9BQC3 489 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 SLC35A5Q9BS91 424 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 SPATA9Q9BWV2 254 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 MFRPQ9BY79 579 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 TRIM15Q9C019 465 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 TPT1P8Q9HAU6 139 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 ZNF304Q9HCX3 659 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 APMAPQ9HDC9 416 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 HCN3Q9P1Z3 774 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 C5AR2Q9P296 337 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 PCDHB3Q9Y5E6 796 aa13.53□□□□□ -0.24
SHMT2-208ENST00000553868 ANKHD1Q8IWZ3 2542 aaKnown RBP13.53□□□□□ -0.24
SHMT2-208ENST00000553868 CDC14CA4D256 554 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 SYNDIG1LA6NDD5 238 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 PRORSD1PA6NEY8 169 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 B4E171 279 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 POLR1CO15160 346 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-208ENST00000553868 SCRG1O75711 98 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 STK17BO94768 372 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 PORP16435 677 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-208ENST00000553868 HTR1EP28566 365 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 TSPAN7P41732 249 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 GSK3BP49841 420 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 ANXA11P50995 505 aaKnown RBP13.52□□□□□ -0.25
SHMT2-208ENST00000553868 XKP51811 444 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 MC2RQ01718 297 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 HSPB3Q12988 150 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 TRIM25Q14258 630 aaKnown RBP13.52□□□□□ -0.25
SHMT2-208ENST00000553868 PRSS53Q2L4Q9 553 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 GTDC1Q4AE62 458 aa13.52□□□□□ -0.25
SHMT2-208ENST00000553868 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
SHMT2-208ENST00000553868 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms