RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 APIPQ96GX9 242 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 SENP5Q96HI0 755 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 PPP3R2Q96LZ3 170 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 BBS4Q96RK4 519 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 EBPLQ9BY08 206 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 ZNF717Q9BY31 904 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 HPF1Q9NWY4 346 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 C1orf109Q9NX04 203 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 TEX10Q9NXF1 929 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 ANKRD10Q9NXR5 420 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 UTS2RQ9UKP6 389 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 PCDHB10Q9UN67 800 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 PPIEQ9UNP9 301 aaKnown RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 DLGAP4Q9Y2H0 992 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 TMED5Q9Y3A6 229 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 HELZ2Q9BYK8 2649 aaKnown RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 KLRC4-KLRK1H3BQV0 150 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 PGRMC2O15173 223 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 SUSD5O60279 629 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 SLC25A12O75746 678 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 BCAS2O75934 225 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 LINC00032P0C843 101 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 NID1P14543 1247 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 CREB1P16220 341 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 NTSP30990 170 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 MPIP34949 423 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 TRHRP34981 398 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 RPL3P39023 403 aaKnown RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 FEN1P39748 380 aaKnown RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 CD96P40200 585 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 ASMTP46597 345 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 CD97P48960 835 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 GPR143P51810 404 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 FOXA1P55317 472 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 NRG3P56975 720 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 ABCE1P61221 599 aaKnown RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 MAGOHP61326 146 aaKnown RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 ERVK-8P63133 956 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 RNF4P78317 190 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 RPP38P78345 283 aaKnown RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 MAD2L1Q13257 205 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 STX3Q13277 289 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 CHI3L2Q15782 390 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 MAPKAPK3Q16644 382 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 GALNTL6Q49A17 601 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 ATP6AP1LQ52LC2 224 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 ZBTB37Q5TC79 503 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 AGBL2Q5U5Z8 902 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 KANK2Q63ZY3 851 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 ATG16L1Q676U5 607 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 NOXRED1Q6NXP6 359 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 GALNT18Q6P9A2 607 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 IKBIPQ70UQ0 350 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 DND1Q8IYX4 353 aaKnown RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 CYP4Z2PQ8N1L4 340 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 LRRC25Q8N386 305 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 FAM13CQ8NE31 585 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 OR7G1Q8NGA0 311 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 DNAJB8Q8NHS0 232 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 NUBPLQ8TB37 319 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 MGARPQ8TDB4 240 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 C16orf78Q8WTQ4 265 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 EXOSC8Q96B26 276 aaKnown RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 ZBTB9Q96C00 473 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 SNRNP40Q96DI7 357 aaKnown RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 FBXL20Q96IG2 436 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 GAL3ST4Q96RP7 486 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 SPATA9Q9BWV2 254 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 CLMPQ9H6B4 373 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 KLHL1Q9NR64 748 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 OLAHQ9NV23 265 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 SIRT5Q9NXA8 310 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 EHD3Q9NZN3 535 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 MYOTQ9UBF9 498 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 PRODH2Q9UF12 536 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 BCAP29Q9UHQ4 241 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 ERVK-19Q9WJR5 959 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 KLF13Q9Y2Y9 288 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 POLR3HQ9Y535 204 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-209ENST00000553855 PCDHGB6Q9Y5F9 930 aa7.74□□□□□ -1.17
PSEN1-209ENST00000553855 SPTA1P02549 2419 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 NUP210LQ5VU65 1888 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 C2orf92A0A1B0GVN3 265 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 TMEM120BA0PK00 339 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 WWP2O00308 870 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 PIP5K1BO14986 540 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 TMPRSS2O15393 492 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 OIP5O43482 229 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 SKAP2O75563 359 aaPredicted RBP7.73□□□□□ -1.17
PSEN1-209ENST00000553855 OR2J2O76002 312 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 DDAH2O95865 285 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 P04436 131 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 CHRNGP07510 517 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 SP1P08047 785 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 DDCP20711 480 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 PRPH2P23942 346 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 ETV4P43268 484 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 SLC1A6P48664 564 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 TMED10P49755 219 aaKnown RBP7.73□□□□□ -1.17
PSEN1-209ENST00000553855 HK2P52789 917 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms