RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 NUDT9Q9BW91 350 aa17.99■□□□□ 0.47
PSEN1-207ENST00000553599 CXorf36Q9H7Y0 433 aa17.99■□□□□ 0.47
PSEN1-207ENST00000553599 SNX8Q9Y5X2 465 aa17.99■□□□□ 0.47
PSEN1-207ENST00000553599 LOC100653049A0A140TA62 436 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 HRKO00198 91 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 KRT34O76011 436 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 ZFAND5O76080 213 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 SOX30O94993 753 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 ANP32DO95626 131 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 ABCB1P08183 1280 aaPredicted RBP17.98■□□□□ 0.47
PSEN1-207ENST00000553599 SSTR4P31391 388 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 MAGEA8P43361 318 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 PSPHP78330 225 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 CHAF1BQ13112 559 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 MMEL1Q495T6 779 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 LRIF1Q5T3J3 769 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 IRAK1BP1Q5VVH5 260 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 ZCCHC12Q6PEW1 402 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 SLC2A7Q6PXP3 512 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 SLC29A4Q7RTT9 530 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 OR52R1Q8NGF1 315 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 OR5L2Q8NGL0 311 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 NUBPLQ8TB37 319 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 FAM120BQ96EK7 910 aaKnown RBP17.98■□□□□ 0.47
PSEN1-207ENST00000553599 MS4A4EQ96PG1 132 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 DEFB126Q9BYW3 111 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 ING2Q9H160 280 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 ZCCHC3Q9NUD5 404 aaKnown RBP17.98■□□□□ 0.47
PSEN1-207ENST00000553599 BCAP29Q9UHQ4 241 aa17.98■□□□□ 0.47
PSEN1-207ENST00000553599 PCSK5Q92824 1860 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 DMXL2Q8TDJ6 3036 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 ARGFXA6NJG6 315 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 CLPSP04118 112 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 KRT16P08779 473 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 CD1EP15812 388 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 PTGER1P34995 402 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 MNAT1P51948 309 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 DCAF7P61962 342 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 TXNL4AP83876 142 aaKnown RBP17.97■□□□□ 0.47
PSEN1-207ENST00000553599 MYBPC3Q14896 1274 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 DEFB109BQ30KR1 87 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 PAGE3Q5JUK9 113 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 ZNF621Q6ZSS3 439 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 TRPM8Q7Z2W7 1104 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 LGI4Q8N135 537 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 C17orf47Q8NEP4 570 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 NUP43Q8NFH3 380 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 INPP5KQ9BT40 448 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 TRIM4Q9C037 500 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 LHPPQ9H008 270 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 PAIP1Q9H074 479 aaKnown RBP17.97■□□□□ 0.47
PSEN1-207ENST00000553599 EFCAB1Q9HAE3 211 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 CPNE5Q9HCH3 593 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 ERVK-11Q9UQG0 969 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 HEMK1Q9Y5R4 338 aaPredicted RBP17.97■□□□□ 0.47
PSEN1-207ENST00000553599 KCNMB2Q9Y691 235 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 GMEB1Q9Y692 573 aa17.97■□□□□ 0.47
PSEN1-207ENST00000553599 TRBV11-1A0A0K0K1C0 115 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 RNF103-CHMP3A0A140T963 221 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 FBP2O00757 339 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 MRASO14807 208 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 KRT75O95678 551 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 PPIBP23284 216 aaKnown RBP17.96■□□□□ 0.47
PSEN1-207ENST00000553599 PTPN6P29350 595 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 SOAT1P35610 550 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 PRIM2P49643 509 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 EMDP50402 254 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 RNF4P78317 190 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 Q0VFX4 171 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 EXOSC7Q15024 291 aaKnown RBP17.96■□□□□ 0.47
PSEN1-207ENST00000553599 H3F3CQ6NXT2 135 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 RETREG3Q86VR2 466 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 ARMC10Q8N2F6 343 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 GALNT16Q8N428 558 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 SLC5A8Q8N695 610 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 ZNF321PQ8N8H1 164 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 C16orf52Q8NHV5 167 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 APOBEC4Q8WW27 367 aaKnown RBP17.96■□□□□ 0.47
PSEN1-207ENST00000553599 ROPN1LQ96C74 230 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 NEURL3Q96EH8 262 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 THOC3Q96J01 351 aaKnown RBP17.96■□□□□ 0.47
PSEN1-207ENST00000553599 SLC35A5Q9BS91 424 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 GID8Q9NWU2 228 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 TAGLN3Q9UI15 199 aa17.96■□□□□ 0.47
PSEN1-207ENST00000553599 ZNF223Q9UK11 482 aaPredicted RBP17.96■□□□□ 0.47
PSEN1-207ENST00000553599 CDK2AP1O14519 115 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 ITGB2P05107 769 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 ITGA3P26006 1051 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 CHI3L1P36222 383 aaPredicted RBP17.95■□□□□ 0.46
PSEN1-207ENST00000553599 CDKN2CP42773 168 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 DUSP8Q13202 625 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 NFYCQ13952 458 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 EBPQ15125 230 aaKnown RBP17.95■□□□□ 0.46
PSEN1-207ENST00000553599 ZNHIT3Q15649 155 aaPredicted RBP17.95■□□□□ 0.46
PSEN1-207ENST00000553599 TRMT5Q32P41 509 aaKnown RBP17.95■□□□□ 0.46
PSEN1-207ENST00000553599 HLA-DQA1Q5Y7H0 255 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 REP15Q6BDI9 236 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 DLEU7Q6UYE1 221 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 C6orf120Q7Z4R8 191 aa17.95■□□□□ 0.46
PSEN1-207ENST00000553599 DHDDSQ86SQ9 333 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms