RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 HDAC3O15379 428 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 NEURL1O76050 574 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 CLPSP04118 112 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 HPCAL1P37235 193 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 OCRLQ01968 901 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 DUSP2Q05923 314 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 MGAT2Q10469 447 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 EBPQ15125 230 aaKnown RBP16.04■□□□□ 0.16
CDK4-208ENST00000551706 ZNF628Q5EBL2 1059 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 PIGGQ5H8A4 983 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 ZNF468Q5VIY5 522 aaPredicted RBP16.04■□□□□ 0.16
CDK4-208ENST00000551706 IL23RQ5VWK5 629 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 C1QL3Q5VWW1 255 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 HLA-DQA1Q5Y7H0 255 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 SPINK14Q6IE38 97 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 OPN5Q6U736 354 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 FAM9CQ8IZT9 166 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 CYP4Z2PQ8N1L4 340 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 LIX1Q8N485 282 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 ZNF615Q8N8J6 731 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 ADCY4Q8NFM4 1077 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 LRRC8CQ8TDW0 803 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 GFM2Q969S9 779 aaKnown RBP16.04■□□□□ 0.16
CDK4-208ENST00000551706 GAL3ST4Q96RP7 486 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 WWTR1Q9GZV5 400 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 AKTIPQ9H8T0 292 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 LIN28AQ9H9Z2 209 aaKnown RBP16.04■□□□□ 0.16
CDK4-208ENST00000551706 MEAF6Q9HAF1 191 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 AGPAT4Q9NRZ5 378 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 INTS9Q9NV88 658 aaKnown RBP16.04■□□□□ 0.16
CDK4-208ENST00000551706 ZNF446Q9NWS9 450 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 HPF1Q9NWY4 346 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 ASIC5Q9NY37 505 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 GIMAP2Q9UG22 337 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 BAIAP2L1Q9UHR4 511 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 ZNF639Q9UID6 485 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 MAPRE3Q9UPY8 281 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 HIVEP3Q5T1R4 2406 aa16.04■□□□□ 0.16
CDK4-208ENST00000551706 C2orf92A0A1B0GVN3 265 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 AKAP10O43572 662 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 SLC25A12O75746 678 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 LRATO95237 230 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 PCSK2P16519 638 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 PRPS1L1P21108 318 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 S1PR1P21453 382 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 NCBP2P52298 156 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDK4-208ENST00000551706 PDE7AQ13946 482 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 EIF2S3LQ2VIR3 472 aaKnown RBP16.03■□□□□ 0.16
CDK4-208ENST00000551706 SLC25A25Q6KCM7 469 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 FAM111BQ6SJ93 734 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 C16orf47Q6ZP98 133 aaPredicted RBP16.03■□□□□ 0.16
CDK4-208ENST00000551706 DND1Q8IYX4 353 aaKnown RBP16.03■□□□□ 0.16
CDK4-208ENST00000551706 TAGAPQ8N103 731 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 CISD2Q8N5K1 135 aaKnown RBP16.03■□□□□ 0.16
CDK4-208ENST00000551706 FAM98AQ8NCA5 519 aaKnown RBP16.03■□□□□ 0.16
CDK4-208ENST00000551706 C17orf47Q8NEP4 570 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 OR9A2Q8NGT5 310 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 CLHC1Q8NHS4 586 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 PIWIL2Q8TC59 973 aaKnown RBP16.03■□□□□ 0.16
CDK4-208ENST00000551706 TP53INP1Q96A56 240 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 SNRNP40Q96DI7 357 aaKnown RBP16.03■□□□□ 0.16
CDK4-208ENST00000551706 SCMH1Q96GD3 660 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 PPP1R36Q96LQ0 422 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 PRPF18Q99633 342 aaKnown RBP16.03■□□□□ 0.16
CDK4-208ENST00000551706 C1orf50Q9BV19 199 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 SH3BP4Q9P0V3 963 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 MAP10Q9P2G4 905 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 PRODH2Q9UF12 536 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 BCAP29Q9UHQ4 241 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 ERVK-11Q9UQG0 969 aa16.03■□□□□ 0.16
CDK4-208ENST00000551706 SETD2Q9BYW2 2564 aaPredicted RBP16.03■□□□□ 0.16
CDK4-208ENST00000551706 A0A087WV62 115 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 SCAMP2O15127 329 aaKnown RBP16.02■□□□□ 0.16
CDK4-208ENST00000551706 PDPK1O15530 556 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 PLOD3O60568 738 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 RASAL1O95294 804 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 SP1P08047 785 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 IFI6P09912 130 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 LBPP18428 481 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 LTB4RQ15722 352 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 FAM180AQ6UWF9 173 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 WDR75Q8IWA0 830 aaKnown RBP16.02■□□□□ 0.16
CDK4-208ENST00000551706 NATD1Q8N6N6 113 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 C16orf52Q8NHV5 167 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 ZFP28Q8NHY6 868 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 ZBED6CLQ96FA7 236 aaPredicted RBP16.02■□□□□ 0.16
CDK4-208ENST00000551706 SGCZQ96LD1 299 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 AMDHD1Q96NU7 426 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 GLIPR2Q9H4G4 154 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 TIMMDC1Q9NPL8 285 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 ATAD3AQ9NVI7 634 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 MARCOQ9UEW3 520 aaPredicted RBP16.02■□□□□ 0.16
CDK4-208ENST00000551706 ATP6V1HQ9UI12 483 aa16.02■□□□□ 0.16
CDK4-208ENST00000551706 KLF13Q9Y2Y9 288 aaPredicted RBP16.02■□□□□ 0.16
CDK4-208ENST00000551706 SHANK1Q9Y566 2161 aa16.02■□□□□ 0.15
CDK4-208ENST00000551706 CNTRLQ7Z7A1 2325 aa16.01■□□□□ 0.15
CDK4-208ENST00000551706 ZFHX3Q15911 3703 aa16.01■□□□□ 0.15
CDK4-208ENST00000551706 WIPF3A6NGB9 483 aa16.01■□□□□ 0.15
CDK4-208ENST00000551706 CAPN14A8MX76 684 aa16.01■□□□□ 0.15
CDK4-208ENST00000551706 PLOD2O00469 737 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms