RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 GPX3P22352 226 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 HILS1P60008 231 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 HSPA14Q0VDF9 509 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 NECTIN1Q15223 517 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 FASTKD1Q53R41 847 aaKnown RBP4.09□□□□□ -1.75
LIMA1-205ENST00000550592 ZC2HC1BQ5TFG8 222 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 PRAMEF7Q5VXH5 474 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 CNSTQ6PJW8 725 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 C1orf186Q6ZWK4 172 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 MIER3Q7Z3K6 550 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 ZFAND4Q86XD8 727 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 PRSS33Q8NF86 280 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 OR52E1Q8NGJ3 308 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 GOLGA5Q8TBA6 731 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 SLC13A3Q8WWT9 602 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 C11orf52Q96A22 123 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 TMEM186Q96B77 213 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 MRPL53Q96EL3 112 aaKnown RBP4.09□□□□□ -1.75
LIMA1-205ENST00000550592 ATXN7L3BQ96GX2 97 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 GPR137Q96N19 417 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 AGAP4Q96P64 663 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 PKP2Q99959 881 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF577Q9BSK1 485 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 TEX10Q9NXF1 929 aaPredicted RBP4.09□□□□□ -1.75
LIMA1-205ENST00000550592 ERRFI1Q9UJM3 462 aaPredicted RBP4.09□□□□□ -1.75
LIMA1-205ENST00000550592 NIP7Q9Y221 180 aaKnown RBP eCLIP4.09□□□□□ -1.75
LIMA1-205ENST00000550592 IGHV3-38A0A0C4DH36 116 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 BICDL2A1A5D9 508 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 CHEK1O14757 476 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 TFECO14948 347 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 NME2P1O60361 137 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 HSF2BPO75031 334 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 ATP6V1G1O75348 118 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 BBOX1O75936 387 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 ALPPP05187 535 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 RNF224P0DH78 156 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 ALPPL2P10696 532 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 AOC1P19801 751 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 HNRNPFP52597 415 aaKnown RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 NDST2P52849 883 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 CRYBA2P53672 197 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 ABCE1P61221 599 aaKnown RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 HERV-K104P63124 156 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 IRX1P78414 480 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 CCZ1BP86790 482 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 CCZ1P86791 482 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 WASHC5Q12768 1159 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 PPP1R8Q12972 351 aaKnown RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 CALCOCO2Q13137 446 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 SLC39A6Q13433 755 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 NFATC2Q13469 925 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 GCKRQ14397 625 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 FASTKD3Q14CZ7 662 aaKnown RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 KRT31Q15323 416 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 SHHQ15465 462 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 RIC1Q4ADV7 1423 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 PARP10Q53GL7 1025 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 HERC4Q5GLZ8 1057 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 EYSQ5T1H1 3165 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 NEK5Q6P3R8 708 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 GDPGP1Q6ZNW5 385 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 ADAMTSL2Q86TH1 951 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 LRRTM1Q86UE6 522 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 BATF2Q8N1L9 274 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 METTL4Q8N3J2 472 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 TMEM185AQ8NFB2 350 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 OR6M1Q8NGM8 313 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 LIPHQ8WWY8 451 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 PCED1BQ96HM7 432 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 LINC00479Q96M42 142 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 ALKBH3Q96Q83 286 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 SPAG8Q99932 426 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 SYT11Q9BT88 431 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 ABCG8Q9H221 673 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 SLC26A1Q9H2B4 701 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 PARLQ9H300 379 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 SYTL2Q9HCH5 934 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 MYOZ2Q9NPC6 264 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 UBE2TQ9NPD8 197 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 IL1RAPQ9NPH3 570 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 TECRQ9NZ01 308 aaKnown RBP4.08□□□□□ -1.76
LIMA1-205ENST00000550592 KCNN3Q9UGI6 736 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 DNPEPQ9ULA0 475 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 MYH15Q9Y2K3 1946 aa4.08□□□□□ -1.76
LIMA1-205ENST00000550592 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.07□□□□□ -1.76
LIMA1-205ENST00000550592 B4GAT1O43505 415 aa4.07□□□□□ -1.76
LIMA1-205ENST00000550592 CALCAP01258 141 aa4.07□□□□□ -1.76
LIMA1-205ENST00000550592 LYNP07948 512 aa4.07□□□□□ -1.76
LIMA1-205ENST00000550592 EZRP15311 586 aaKnown RBP4.07□□□□□ -1.76
LIMA1-205ENST00000550592 UGT1A4P22310 534 aa4.07□□□□□ -1.76
LIMA1-205ENST00000550592 ACP1P24666 158 aa4.07□□□□□ -1.76
LIMA1-205ENST00000550592 PKLRP30613 574 aa4.07□□□□□ -1.76
LIMA1-205ENST00000550592 FCGR2BP31994 310 aaPredicted RBP4.07□□□□□ -1.76
LIMA1-205ENST00000550592 FCGR2CP31995 323 aa4.07□□□□□ -1.76
LIMA1-205ENST00000550592 RPL9P32969 192 aaKnown RBP4.07□□□□□ -1.76
LIMA1-205ENST00000550592 ALDH3B1P43353 468 aa4.07□□□□□ -1.76
LIMA1-205ENST00000550592 TNFRSF4P43489 277 aa4.07□□□□□ -1.76
LIMA1-205ENST00000550592 ZFP36L2P47974 494 aaKnown RBP4.07□□□□□ -1.76
LIMA1-205ENST00000550592 LUMP51884 338 aaPredicted RBP4.07□□□□□ -1.76
LIMA1-205ENST00000550592 SRP54P61011 504 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms