RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SSR2P43308 183 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 NR0B1P51843 470 aaKnown RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 IMPG1Q17R60 797 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 AP5B1Q2VPB7 878 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 SPIN4Q56A73 249 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 C6orf136Q5SQH8 315 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 OGFOD2Q6N063 350 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 GALNT18Q6P9A2 607 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 HSDL2Q6YN16 418 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 MEX3BQ6ZN04 569 aaKnown RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 ZNF793Q6ZN11 406 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 ZNF321PQ8N8H1 164 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 OR52N2Q8NGI0 321 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 DAZLQ92904 295 aaKnown RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 TUBGCP3Q96CW5 907 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 APIPQ96GX9 242 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 KCNC2Q96PR1 638 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 RASL10BQ96S79 203 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 MAPKAP1Q9BPZ7 522 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 EBF4Q9BQW3 602 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 CENPKQ9BS16 269 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 TBCDQ9BTW9 1192 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 CCDC28BQ9BUN5 200 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 MRPL1Q9BYD6 325 aaKnown RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 ALOXE3Q9BYJ1 711 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 NSRP1Q9H0G5 558 aaKnown RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 WDR55Q9H6Y2 383 aaPredicted RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 DDX31Q9H8H2 851 aaKnown RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 DEPPQ9NTK1 212 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 AHSPQ9NZD4 102 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 PPIEQ9UNP9 301 aaKnown RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 C17orf105B2RV13 164 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 SNX3O60493 162 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 DIAPH2O60879 1101 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 GPR143P51810 404 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 PPIAP62937 165 aaKnown RBP12.41□□□□□ -0.42
NUP188-211ENST00000550219 RAE1P78406 368 aaKnown RBP12.41□□□□□ -0.42
NUP188-211ENST00000550219 EMX2Q04743 252 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 ATP6AP1LQ52LC2 224 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 RFTN2Q52LD8 501 aaPredicted RBP12.41□□□□□ -0.42
NUP188-211ENST00000550219 SPDYAQ5MJ70 313 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 OR4C11Q6IEV9 310 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 COMMD6Q7Z4G1 85 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 SPATA21Q7Z572 469 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 PIGWQ7Z7B1 504 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 GPALPP1Q8IXQ4 340 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 ZNF295-AS1Q8N0V1 137 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 ZCCHC7Q8N3Z6 543 aaKnown RBP12.41□□□□□ -0.42
NUP188-211ENST00000550219 RPRMLQ8N4K4 120 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 MARVELD2Q8N4S9 558 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 C1orf52Q8N6N3 182 aaKnown RBP12.41□□□□□ -0.42
NUP188-211ENST00000550219 ZFP62Q8NB50 900 aaPredicted RBP12.41□□□□□ -0.42
NUP188-211ENST00000550219 OR2M7Q8NG81 312 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 OR14A16Q8NHC5 309 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 CEP70Q8NHQ1 597 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 C16orf52Q8NHV5 167 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 SLC2A12Q8TD20 617 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 C10orf82Q8WW14 230 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 THOC1Q96FV9 657 aaKnown RBP12.41□□□□□ -0.42
NUP188-211ENST00000550219 PPP1R36Q96LQ0 422 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 OR52B2Q96RD2 323 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 CCT8L2Q96SF2 557 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 SORBS1Q9BX66 1292 aaKnown RBP12.41□□□□□ -0.42
NUP188-211ENST00000550219 ROGDIQ9GZN7 287 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 ASIC5Q9NY37 505 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 MYOTQ9UBF9 498 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 GIMAP2Q9UG22 337 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 DCTN4Q9UJW0 460 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 TMED5Q9Y3A6 229 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 SPACA6W5XKT8 324 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 ABCA12Q86UK0 2595 aa12.41□□□□□ -0.42
NUP188-211ENST00000550219 A0A0A6YYD5 115 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 SYNDIG1LA6NDD5 238 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 TMEM200CA6NKL6 621 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 CTNSO60931 367 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 PEX11AO75192 247 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 SEC22BO75396 215 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 EEDO75530 441 aaKnown RBP12.4□□□□□ -0.42
NUP188-211ENST00000550219 FAM107AO95990 144 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 LBPP18428 481 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 HIST1H1TP22492 207 aaPredicted RBP12.4□□□□□ -0.42
NUP188-211ENST00000550219 CPN2P22792 545 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 ATP5A1P25705 553 aaKnown RBP12.4□□□□□ -0.42
NUP188-211ENST00000550219 SSTR2P30874 369 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 RAP1GDS1P52306 607 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 ARFIP2P53365 341 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 ERVK-8P63133 956 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 ACSM2AQ08AH3 577 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 ZNF750Q32MQ0 723 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 LSM12Q3MHD2 195 aaKnown RBP12.4□□□□□ -0.42
NUP188-211ENST00000550219 ACSM2BQ68CK6 577 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 MRM1Q6IN84 353 aaKnown RBP12.4□□□□□ -0.42
NUP188-211ENST00000550219 ARHGAP11AQ6P4F7 1023 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 PAGE2Q7Z2X7 111 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 CPLX4Q7Z7G2 160 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 OR4N5Q8IXE1 308 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 ACOT4Q8N9L9 421 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 MORN4Q8NDC4 146 aa12.4□□□□□ -0.42
NUP188-211ENST00000550219 PTPMT1Q8WUK0 201 aaPredicted RBP12.4□□□□□ -0.42
NUP188-211ENST00000550219 ELAC2Q9BQ52 826 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms