RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 MICAQ29983 383 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 LRIT3Q3SXY7 679 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 C22orf42Q6IC83 251 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 FRMD1Q8N878 549 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 CYB561A3Q8NBI2 242 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 ASB16Q96NS5 453 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 MCCC1Q96RQ3 725 aaPredicted RBP14.21□□□□□ -0.13
CUX1-214ENST00000550008 AKAP8O43823 692 aaKnown RBP14.21□□□□□ -0.13
CUX1-214ENST00000550008 KIAA0513O60268 411 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 PCSK6P29122 969 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 PBX2P40425 430 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 BNC1Q01954 994 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 GAB1Q13480 694 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 FBXO43Q4G163 708 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 FCRLBQ6BAA4 426 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 ALG1LQ6GMV1 187 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 TTLL10Q6ZVT0 673 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 OR10H5Q8NGA6 315 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 NDNFQ8TB73 568 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 C16orf58Q96GQ5 468 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 MYNNQ9NPC7 610 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 CACNA1IQ9P0X4 2223 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 RCBTB2O95199 551 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 CD160O95971 181 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 OMPP47874 163 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 EMX1Q04741 257 aaPredicted RBP14.21□□□□□ -0.14
CUX1-214ENST00000550008 PTGES3Q15185 160 aaKnown RBP14.21□□□□□ -0.14
CUX1-214ENST00000550008 GFOD2Q3B7J2 385 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 SPRED2Q7Z698 418 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 ABHD11Q8NFV4 315 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 FAM3CQ92520 227 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 NDC1Q9BTX1 674 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 LGR4Q9BXB1 951 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 HDHD5Q9BXW7 423 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 PBX4Q9BYU1 374 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 PCDHGA2Q9Y5H1 932 aa14.21□□□□□ -0.14
CUX1-214ENST00000550008 RDH16O75452 317 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 ETHE1O95571 254 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 HIST1H1TP22492 207 aaPredicted RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 SLC15A1P46059 708 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 RPS15AP62244 130 aaKnown RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 YBX1P67809 324 aaKnown RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 MAD2L1BPQ15013 274 aaPredicted RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 ZNF791Q3KP31 576 aaPredicted RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 C1orf189Q5VU69 101 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 SCAIQ8N9R8 606 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 CXorf36Q9H7Y0 433 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 MARK1Q9P0L2 795 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 GMEB2Q9UKD1 530 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 AHCTF1Q8WYP5 2266 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 A0A0A6YYC8 382 aaPredicted RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 I3L1I5 382 aaPredicted RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 SGK494L7N484 410 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 CSTAP01040 98 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 ZNF3P17036 446 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 LNX2Q8N448 690 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 PHOSPHO2Q8TCD6 241 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 ADAMTS19Q8TE59 1207 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 SAGE1Q9NXZ1 904 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 RLN1P04808 185 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 DAPP51397 102 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 PHF19Q5T6S3 580 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 C18orf63Q68DL7 685 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 TMEM150AQ86TG1 271 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 METTL4Q8N3J2 472 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 OR5K2Q8NHB8 316 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 UBTD2Q8WUN7 234 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 TRNT1Q96Q11 434 aaKnown RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 KCNN2Q9H2S1 579 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 TRPV5Q9NQA5 729 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 NECTIN3Q9NQS3 549 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 MED16Q9Y2X0 877 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 PMF1-BGLAPU3KQ54 211 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 PRSS38A1L453 326 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 WASHC1A8K0Z3 465 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 BOLA2-SMG1P6H3BVE0 249 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 SCDO00767 359 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 PSKH1P11801 424 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 CXCR1P25024 350 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 GRPRP30550 384 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 OPRL1P41146 370 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 ERV3-1Q14264 604 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 EXOSC7Q15024 291 aaKnown RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 C9orf50Q5SZB4 431 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 WASH2PQ6VEQ5 465 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 FAM83HQ6ZRV2 1179 aaPredicted RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 IKBIPQ70UQ0 350 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 PROKR2Q8NFJ6 384 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 OR2L5Q8NG80 312 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 NKD1Q969G9 470 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 ZFYVE21Q9BQ24 234 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 TREX2Q9BQ50 279 aaPredicted RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 GTPBP2Q9BX10 602 aaKnown RBP14.2□□□□□ -0.14
CUX1-214ENST00000550008 PELI2Q9HAT8 420 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 SLC23A2Q9UGH3 650 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 OR51B4Q9Y5P0 310 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 CSNK1G3Q9Y6M4 447 aa14.2□□□□□ -0.14
CUX1-214ENST00000550008 SPTBN2O15020 2390 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 A8MV72 311 aaPredicted RBP14.19□□□□□ -0.14
CUX1-214ENST00000550008 C11orf98E9PRG8 122 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms