RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 MSANTD1Q6ZTZ1 278 aa19.69■□□□□ 0.74
VPS29-206ENST00000549578 CLEC4FQ8N1N0 589 aa19.69■□□□□ 0.74
VPS29-206ENST00000549578 OR2L13Q8N349 312 aa19.69■□□□□ 0.74
VPS29-206ENST00000549578 SIRT6Q8N6T7 355 aa19.69■□□□□ 0.74
VPS29-206ENST00000549578 OR7G1Q8NGA0 311 aa19.69■□□□□ 0.74
VPS29-206ENST00000549578 THAP3Q8WTV1 239 aaPredicted RBP19.69■□□□□ 0.74
VPS29-206ENST00000549578 ERP27Q96DN0 273 aa19.69■□□□□ 0.74
VPS29-206ENST00000549578 PANX1Q96RD7 426 aa19.69■□□□□ 0.74
VPS29-206ENST00000549578 LHPPQ9H008 270 aa19.69■□□□□ 0.74
VPS29-206ENST00000549578 RMND5AQ9H871 391 aa19.69■□□□□ 0.74
VPS29-206ENST00000549578 C19orf53Q9UNZ5 99 aaPredicted RBP19.69■□□□□ 0.74
VPS29-206ENST00000549578 A0A1W2PP18 115 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 A8MUI8 341 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 PRKAG1P54619 331 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 TLR1Q15399 786 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 TBR1Q16650 682 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 SPDYE7PQ495Y7 208 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 C6orf10Q5SRN2 563 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 TREML1Q86YW5 311 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 OR5AK3PQ8NH89 298 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 C16orf52Q8NHV5 167 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 PSMF1Q92530 271 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 GTF2H4Q92759 462 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 EXTL1Q92935 676 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 FAM120BQ96EK7 910 aaKnown RBP19.68■□□□□ 0.74
VPS29-206ENST00000549578 DEFB126Q9BYW3 111 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 PRORYQ9H606 182 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 LIN28AQ9H9Z2 209 aaKnown RBP19.68■□□□□ 0.74
VPS29-206ENST00000549578 ZCCHC3Q9NUD5 404 aaKnown RBP19.68■□□□□ 0.74
VPS29-206ENST00000549578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.68■□□□□ 0.74
VPS29-206ENST00000549578 DTX4Q9Y2E6 619 aa19.68■□□□□ 0.74
VPS29-206ENST00000549578 LOC100653049A0A140TA62 436 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 RFXANKO14593 260 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 SLC22A2O15244 555 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 PRAMEF2O60811 474 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 DCTN3O75935 186 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 KRT34O76011 436 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 GSNP06396 782 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 EMDP50402 254 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 AP2B1P63010 937 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 RNF4P78317 190 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 GAB1Q13480 694 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 PAGE3Q5JUK9 113 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 FCRLBQ6BAA4 426 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 SNX32Q86XE0 403 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 ITCHQ96J02 903 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 LRRC37BQ96QE4 947 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 GAL3ST4Q96RP7 486 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 C3orf14Q9HBI5 128 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 SLC6A13Q9NSD5 602 aa19.67■□□□□ 0.74
VPS29-206ENST00000549578 DYTNA2CJ06 578 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 EMC8O43402 210 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 BCAS2O75934 225 aaPredicted RBP19.66■□□□□ 0.74
VPS29-206ENST00000549578 ZFAND5O76080 213 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 IFI6P09912 130 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 CCT3P49368 545 aaKnown RBP19.66■□□□□ 0.74
VPS29-206ENST00000549578 SOX8P57073 446 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 CBX1P83916 185 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 LRRC74AQ0VAA2 488 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 EBPQ15125 230 aaKnown RBP19.66■□□□□ 0.74
VPS29-206ENST00000549578 COL28A1Q2UY09 1125 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 IRAK1BP1Q5VVH5 260 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 B3GNTL1Q67FW5 361 aaPredicted RBP19.66■□□□□ 0.74
VPS29-206ENST00000549578 JMJD6Q6NYC1 403 aaPredicted RBP19.66■□□□□ 0.74
VPS29-206ENST00000549578 TMEM64Q6YI46 380 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 C16orf47Q6ZP98 133 aaPredicted RBP19.66■□□□□ 0.74
VPS29-206ENST00000549578 SLC29A4Q7RTT9 530 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 GPR155Q7Z3F1 870 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 RETREG3Q86VR2 466 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 POU5F2Q8N7G0 328 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 NUP43Q8NFH3 380 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 FDCSPQ8NFU4 85 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 GOT1L1Q8NHS2 421 aaPredicted RBP19.66■□□□□ 0.74
VPS29-206ENST00000549578 TSPEARQ8WU66 669 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 SLC25A23Q9BV35 468 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 EQTNQ9NQ60 294 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 GPR83Q9NYM4 423 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 NTMQ9P121 344 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 NDUFAF1Q9Y375 327 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 HEMK1Q9Y5R4 338 aaPredicted RBP19.66■□□□□ 0.74
VPS29-206ENST00000549578 RNF103-CHMP3A0A140T963 221 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 TMEM200CA6NKL6 621 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 OR6C76A6NM76 312 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 ANGPT2O15123 496 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 MAN1A2O60476 641 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 COQ9O75208 318 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 PSMG1O95456 288 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 PRR5P85299 388 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 MYBPC3Q14896 1274 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 MAPRE2Q15555 327 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 GTDC1Q4AE62 458 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 ZNF621Q6ZSS3 439 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 OR8K3Q8NH51 312 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 NPAS2Q99743 824 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 ITPAQ9BY32 194 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 WWTR1Q9GZV5 400 aa19.66■□□□□ 0.74
VPS29-206ENST00000549578 LEF1Q9UJU2 399 aaPredicted RBP19.66■□□□□ 0.74
VPS29-206ENST00000549578 FBP2O00757 339 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 ANP32DO95626 131 aa19.65■□□□□ 0.74
VPS29-206ENST00000549578 C1QCP02747 245 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms