RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CCNIQ14094 377 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 SLC9B1Q4ZJI4 515 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 LYSMD4Q5XG99 296 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 TMEM220Q6QAJ8 160 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 SERPINA13PQ6UXR4 307 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 TMPRSS11FQ6ZWK6 438 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 OOSP2Q86WS3 158 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF721Q8TF20 911 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 IFT81Q8WYA0 676 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 LRRC58Q96CX6 371 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 KLHDC7BQ96G42 594 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 C3orf30Q96M34 536 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 RILPQ96NA2 401 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 MS4A4EQ96PG1 132 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 FAM111AQ96PZ2 611 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 SPAG4Q9NPE6 437 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 IL1RAPQ9NPH3 570 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 OBP2BQ9NPH6 170 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 INPP5EQ9NRR6 644 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 TAS2R1Q9NYW7 299 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 CDC14AQ9UNH5 594 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 EIF3LQ9Y262 564 aaKnown RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 SH3D21A4FU49 640 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 NPEPPSL1A6NEC2 478 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 SAGE2PA6NJ88 616 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 TCP11X1B4DZS4 312 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 BCAT2O15382 392 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 TRIM3O75382 744 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 SLC22A3O75751 556 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 KRT36O76013 467 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 KRT75O95678 551 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 CHEK2O96017 543 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 HOXD4P09016 255 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 AGAP20933 346 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 PTGDSP41222 190 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 POLR2JP52435 117 aaKnown RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 ELF3P78545 371 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 HSD11B2P80365 405 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 C19orf57Q0VDD7 668 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 EXT1Q16394 746 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 NTRK2Q16620 822 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF791Q3KP31 576 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 KDM4DQ6B0I6 523 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 FIGNL1Q6PIW4 674 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 TMCO2Q7Z6W1 182 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 PEX5LQ8IYB4 626 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 CPNE9Q8IYJ1 553 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 ST13P4Q8IZP2 240 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 TSTD1Q8NFU3 115 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 NMD3Q96D46 503 aaKnown RBP4.56□□□□□ -1.68
SCAF11-212ENST00000549162 CFAP36Q96G28 342 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 ABHD17AQ96GS6 310 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 PWWP2AQ96N64 755 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 NMNAT2Q9BZQ4 307 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 ADAP2Q9NPF8 381 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 FBLN5Q9UBX5 448 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF835Q9Y2P0 537 aa4.56□□□□□ -1.68
SCAF11-212ENST00000549162 K7ESM1 405 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 BANF1O75531 89 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 BMP10O95393 424 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 DDAH2O95865 285 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 HNRNPCP07910 306 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 BGNP21810 368 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 RANBP1P43487 201 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 KCNJ5P48544 419 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 RAB1AP62820 205 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SLBPQ14493 270 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 HIST2H2ACQ16777 129 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 CT83Q5H943 113 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 HIST2H2AA3Q6FI13 130 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 GALNT15Q8N3T1 639 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ARL14Q8N4G2 192 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SCAIQ8N9R8 606 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 DNAAF3Q8N9W5 541 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 TFGQ92734 400 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 AMDHD1Q96NU7 426 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 NLNQ9BYT8 704 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 POTEKPQ9BYX7 375 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 LINC00470Q9BZP3 86 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SOX17Q9H6I2 414 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ACSS2Q9NR19 701 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 IRAK4Q9NWZ3 460 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 CNOT2Q9NZN8 540 aaKnown RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 STOML1Q9UBI4 398 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 TBC1D29Q9UFV1 150 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ANAPC2Q9UJX6 822 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 ASB1Q9Y576 335 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 TMEM200CA6NKL6 621 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 C4orf51C9J302 202 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 D6RAR5 112 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 BTN3A3O00478 584 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 STSP08842 583 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 CSNK2A2P19784 350 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-212ENST00000549162 CBLP22681 906 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 IFNGR2P38484 337 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 PMELP40967 661 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 PPICP45877 212 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 SLC6A8P48029 635 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 DYNLT1P63172 113 aa4.55□□□□□ -1.68
SCAF11-212ENST00000549162 KCNJ10P78508 379 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms